Secundilactobacillus paracollinoides: AYR62_05010
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Entry
AYR62_05010 CDS
T04675
Name
(GenBank) tRNA pseudouridine(55) synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lpd
Secundilactobacillus paracollinoides
Brite
KEGG Orthology (KO) [BR:
lpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lpd03016
]
AYR62_05010
Enzymes [BR:
lpd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AYR62_05010
Transfer RNA biogenesis [BR:
lpd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AYR62_05010
Prokaryotic type
AYR62_05010
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ANZ63511
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All DBs
Position
1144163..1145062
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AA seq
299 aa
AA seq
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MNGIIPLYKERGMTSHDCVSQLRKILHQKKVGHSGTLDPSVDGVLPVCVGSATKVVDYLL
NHRKVYRGSVTLGFSTETEDLDGDEVDRQPLSAPFTDEAIDTVLQTLTGDLQQTPPMYSA
VKVNGRKLYEYARKHETVERPVRTIHVARFDRTAPSTFDETTGTQTFTFEVECSKGTYVR
TLAVQAGEALGVPSVMASLTRVESGGFTLQETISLAQVKAAVEDDDLSFLRPLDRALDNY
PEIELTTALWRGVQNGVWLLQREVNSDAPIVALRYDNEIKALYKLVDDKYKPLKMFSTK
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgaacggaattatcccactgtataaagagcgcggcatgaccagtcacgactgtgtgagt
cagcttcgcaaaatcttacaccaaaaaaaggttggtcattcgggcacgcttgacccaagt
gttgatggtgtgctgccagtttgtgtcggcagtgccactaaagtggtggactatttgctg
aatcatcgaaaggtttatcgtggcagcgttacgcttggcttttccactgagactgaggat
ctagacggtgatgaagtcgaccggcaaccgctaagtgccccgtttacggatgaggcaatt
gatactgttttacagacactcacgggtgatttacaacagacgccaccaatgtattcagca
gtgaaggtcaacggccgaaaactgtacgaatacgcacgaaaacacgaaactgttgagcgc
cccgtccgcaccattcatgtggcccggttcgaccggacagcgccaagcacgtttgatgaa
acaacgggcacccagacctttacgtttgaggtggaatgttcaaagggcacctatgtccgg
acgcttgccgttcaagccggtgaagcattgggtgtgccgtcagtgatggcatcgttgacc
cgggtcgaaagcgggggctttacgctgcaggagacgatttctctggcacaggtcaaggcc
gcggttgaagatgatgacctgagttttctacggccactagaccgggcattggataactac
cctgaaattgaactaacgaccgcgctttggcggggcgtgcaaaacggcgtctggttgtta
cagcgagaggtcaatagtgatgcgccaattgttgcattgcgttatgataacgaaattaag
gcgttgtacaaattagttgatgataagtacaagccgttaaaaatgtttagtacgaagtag
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