Secundilactobacillus paracollinoides: AYR62_05255
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Entry
AYR62_05255 CDS
T04675
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
lpd
Secundilactobacillus paracollinoides
Pathway
lpd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AYR62_05255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpd03400
]
AYR62_05255
DNA repair and recombination proteins [BR:
lpd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AYR62_05255
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AYR62_05255
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
ANZ63557
UniProt:
A0A1B2J0L9
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Position
1196869..1197657
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AA seq
262 aa
AA seq
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MAGQIMDFNGIVMMQKNYRERDLLVKFFTMEAGKRMFFIRGAKKRGFKMTADLLPFTYGT
YVGDLRDPGLSYINAVKETAHFQNISEDIEKNAYATYIMSLLDRAIPDNELLGSWYNRLY
HGLLAIDQGLDAGIVANIFEVQLLELFGVAPNLRNCVICGRTDLPFDYSESYGGLLCQNH
WHMDPNRLKLDQRTIFYLRQFSAVDLTKLSSIKVHPETKHHLRLALDMIYSDTVGVYPRS
KRFIDQMNKWSDKLPHPTDDKN
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggccggccaaattatggactttaacggcatcgtaatgatgcagaaaaactatcgtgaa
cgagatctactggttaagttttttaccatggaggctggcaaacggatgttttttatccgg
ggtgcgaaaaaacgcgggtttaaaatgacggcggatctgttgccctttacgtatggcacc
tacgtgggtgatctgcgggatcccgggctgtcgtacatcaatgcagtgaaggaaacagct
cactttcaaaatattagtgaggatattgaaaagaacgcttatgcgacgtatattatgtca
ctgcttgatcgggcaattcctgataacgaactgttaggcagctggtataaccggctgtat
catgggctgttggcgatcgaccaaggtctggacgccggtatcgttgctaatatttttgaa
gtgcaacttctggaattgtttggtgtggcgcccaatctacgcaactgcgtgatctgtggg
cgaacagatttaccgttcgactactcggaatcttatggtggtctgctttgtcaaaatcac
tggcatatggatccgaaccgcctaaagttggaccagcgaacgattttttacctgcgccaa
ttttcagcggttgacctcacgaaattatcatccatcaaggtccatccagaaacgaagcat
catctccggttagccttggatatgatctacagcgatactgtgggtgtttacccccgcagc
aaacggtttattgaccaaatgaataagtggtcggataagttacctcatccgacagacgac
aagaactag
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