Secundilactobacillus paracollinoides: AYR62_06685
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Entry
AYR62_06685 CDS
T04675
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
lpd
Secundilactobacillus paracollinoides
Brite
KEGG Orthology (KO) [BR:
lpd00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AYR62_06685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpd03019
]
AYR62_06685
03009 Ribosome biogenesis [BR:
lpd03009
]
AYR62_06685
03036 Chromosome and associated proteins [BR:
lpd03036
]
AYR62_06685
Enzymes [BR:
lpd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
AYR62_06685
Messenger RNA biogenesis [BR:
lpd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AYR62_06685
Ribosome biogenesis [BR:
lpd03009
]
Eukaryotic type
90S particles
RNase
AYR62_06685
Prokaryotic type
rRNA processing factors
AYR62_06685
Chromosome and associated proteins [BR:
lpd03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
AYR62_06685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
DND1_DSRM
Dicer_dsRBD
Motif
Other DBs
NCBI-ProteinID:
ANZ63806
LinkDB
All DBs
Position
complement(1501540..1502238)
Genome browser
AA seq
232 aa
AA seq
DB search
MIQGLNELLKKRFHITIHNQDLLDEAFTQASYVNEHPNQNLKFYERIEFLGDAVMQLVVS
EYIYKRYPKLPQGRLTRLRAAMVNEDSFASFARECTFDKYIRLGKGEEKAHARERDSLLC
DIFESFIGALYLDQGVEPVIAFSHQVIFPKLDEGRFDEFFDHKTELQEVAQQNGPVAIDY
ELVSEDGPDNDRAFKVAVTIDGKELGIGEGHSKKHAEQVAAKAALNKLQANN
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
ttgatacaagggttaaatgaactactgaagaaacgctttcacattacgattcacaatcaa
gatctgctggacgaagcctttacccaggcgtcgtacgtgaacgagcaccctaaccagaat
cttaaattttacgaacgcatcgaatttttgggtgatgcggtcatgcagttagtcgtgtca
gaatatatttataaacgctatccaaaattacctcagggtcggttgacgcgtctgcgcgcc
gcaatggtcaacgaggatagttttgcgagctttgcgcgtgaatgtacctttgataagtac
attcgactgggtaagggtgaggaaaaggcacacgcgcgggaacgtgactcgctgctatgt
gacatttttgaatcctttattggtgctttgtaccttgatcaaggagtggaacccgtcatt
gccttttctcatcaggtgatctttccaaaacttgatgagggccggttcgacgaattcttt
gatcacaaaacagaattacaagaagtcgcccagcaaaacggacctgtggccattgactac
gaacttgtttcagaggatggcccggataacgaccgggctttcaaggtggccgtgaccatt
gacggtaaggaacttgggatcggtgaaggccactctaagaaacatgccgaacaggttgca
gctaaagcagcgctgaataaattacaggcgaacaactaa
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