Secundilactobacillus paracollinoides: AYR62_06755
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Entry
AYR62_06755 CDS
T04675
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
lpd
Secundilactobacillus paracollinoides
Pathway
lpd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AYR62_06755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpd03400
]
AYR62_06755
Enzymes [BR:
lpd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AYR62_06755
DNA repair and recombination proteins [BR:
lpd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AYR62_06755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
AAA_30
TrwB_AAD_bind
DAP3
Zn_ribbon_6
PIF1
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
ANZ63819
LinkDB
All DBs
Position
complement(1516675..1519080)
Genome browser
AA seq
801 aa
AA seq
DB search
MSQVAEVIVDVPTMQMNTPYSYLIPAALTTPLLPGMRVIVPFGNGSRKVQGFVWQVHEQV
PTTHELKTIDSVMDLSPVLNKELLAMADWLAKTTFAFTITVLLTMLPNALKAAYERWATP
NSDLDPASKKRLFGEQEKIELTDKLPAAQLNELMGLYRKHEISVTYEVKSKGHAKQVTMV
KPAMSVAELQEAKQQLRITAVKQADLLDYLVTQTDLISQPALEKTLGITSTVIKNAAEKG
WLTRFQAEVYRDPLSRAVDKTRPLHLNEAQQKAVSAICAATDDHEDTTFLLEGVTGSGKT
EVYLQAIANALEKGQNALMLVPEISLTPQIVGRVRGRFGKQVAVLHSGLSAGERFDEWRR
IDRGEARVVVGARSAVFAPLTNIGIIIMDEEHEASYKQDDNPRYHARDVALWRSRYHHCP
VVLGSATPSLESRARAQKNRYQRLLLPTRVNQQALPEATIVDMTQELQKHAESTFSSPLM
AAVNDRLAKGEQTLLMLNRRGYSSFVMCRDCGFVLKCPNCDISLTLHMDSHSMKCHYCGH
EEPIPQICPNCHSHHIRYYGTGTQKVETELKQLLPTARILRMDVDTTRRKGAHERLLRQF
GNHEADILLGTQMIAKGLDFPDVTLVGVLNADTALSLPDFRSSERTFQLLTQVSGRAGRA
QKPGQVFIQTYNPEHYAIQLAKSQDYERFFLTEMKLRHQGNYPPYYFAVKVTASDVEERV
AAAAIHQIAAQLQAGMSQSAIVLGPTPSAIARVNKRYYYQLVIKYKQEPQLSALLFNLLN
QAQKNRKGLQIAIDNNPMSFM
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaggttgcagaagtcattgttgatgtgccaacgatgcaaatgaacacgccgtat
tcatatttgattcctgctgcgctgacaacgcccttactgccgggaatgcgcgtgatcgtg
ccctttggaaatggcagtcgaaaggttcagggatttgtgtggcaggtgcacgagcaagta
cccacgacccacgaattaaaaacgatcgatagcgtcatggatctcagtccggttctgaat
aaagagttattggcgatggctgattggctggcgaaaacgacttttgcgtttactatcacc
gtgttattgacgatgctgccaaacgccttgaaagctgcttatgaacgctgggcgacgcct
aattcggacttagatccggcctcaaagaaacgactttttggcgagcaggaaaaaattgag
ctgacggataaattaccggctgcccaacttaatgaactgatgggcttgtatcggaaacat
gagatctcggtaacctacgaagtgaaaagtaagggccatgccaaacaagtgacaatggtg
aagccggcaatgagtgtggctgaactacaggaagccaagcaacaacttcggataactgct
gtcaaacaggctgacctattagattatttagtgacccagacggaccttatcagccaacca
gcgctggagaaaacgctcggcattacgagtaccgtcattaagaatgctgcggaaaagggc
tggctgacgcggttccaagcggaagtgtatcgcgacccgttgagtcgggcggtcgataag
actcggccgttgcacctgaatgaggcgcaacaaaaagcagtcagtgccatttgtgccgca
acggatgaccacgaagacacaacatttcttcttgagggtgtgacgggaagtggcaagacg
gaggtgtatctgcaagccatcgccaatgcacttgaaaaggggcaaaatgccctgatgtta
gtcccagaaatttccctgacgccgcagatcgttggccgggtcagaggacgctttggtaaa
caagttgccgtgctacatagtgggttgtcggccggagaacggtttgatgagtggcggcga
atcgaccgtggcgaagctcgtgtcgttgttggcgcgcggtctgcagtgtttgcgccactg
accaacatcggcatcatcatcatggatgaggaacacgaagcgagttataaacaggacgac
aatccacggtatcacgcccgcgacgtcgcgttatggcgtagtcgttatcaccactgccca
gttgtattggggagtgcaacaccatctttggagagtcgtgcaagggcgcagaagaatcgc
tatcagcgattactgttgccaacgcgagttaaccaacaagcgttacctgaagccacgatc
gtggatatgacgcaggaactgcaaaaacatgctgaaagtacgttttcttctcccctaatg
gcggcggtgaacgaccggttagccaagggtgagcagacgcttttgatgcttaatcgccgc
ggctattcgtcatttgtgatgtgtcgtgattgcgggtttgtcttaaagtgtccaaactgt
gatatttcattgacgcttcacatggacagccacagtatgaaatgccactattgcggacat
gaggagccaattcctcaaatttgtccaaattgtcattcacaccatattcgctactatggg
acggggacgcaaaaggttgaaacagaactcaaacaactgttaccaacagctcgaatcttg
cgaatggatgtggataccacgcggcgcaagggtgctcatgagcgccttttgcgacagttt
ggcaaccacgaagcggatatcctgctggggacacaaatgattgcgaagggactggatttt
cccgatgtgacattagttggcgtgttgaacgccgatactgcgcttagcctacccgatttt
cggtcgagcgagcgcacattccaactgttgactcaggtgagcgggcgagccggccgggca
caaaaaccaggtcaggtttttattcaaacgtataatccggagcactatgccattcaactg
gcgaagtcgcaggactatgagcggtttttcttgaccgaaatgaaattgcggcaccagggc
aactatccgccgtactattttgcggttaaggtgacagccagtgacgttgaggaacgggtt
gcggcggctgccattcatcaaattgccgcccaattacaagctgggatgagtcaaagtgcg
attgtccttggcccgacgccaagcgcaattgctcgtgtgaataagcggtactactatcaa
ttagtgatcaagtataagcaggagccgcaattgtcggcgctcttatttaatctactgaat
caagcacaaaagaatcgaaaaggattgcagattgcaatcgataataatccaatgagtttt
atgtaa
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