Secundilactobacillus paracollinoides: AYR62_07170
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Entry
AYR62_07170 CDS
T04675
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lpd
Secundilactobacillus paracollinoides
Pathway
lpd03030
DNA replication
lpd03410
Base excision repair
lpd03420
Nucleotide excision repair
lpd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AYR62_07170
03410 Base excision repair
AYR62_07170
03420 Nucleotide excision repair
AYR62_07170
03440 Homologous recombination
AYR62_07170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpd03032
]
AYR62_07170
03400 DNA repair and recombination proteins [BR:
lpd03400
]
AYR62_07170
Enzymes [BR:
lpd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AYR62_07170
DNA replication proteins [BR:
lpd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AYR62_07170
DNA repair and recombination proteins [BR:
lpd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AYR62_07170
NER (nucleotide excision repair)
GGR (global genome repair) factors
AYR62_07170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
ANZ63891
LinkDB
All DBs
Position
complement(1595958..1598624)
Genome browser
AA seq
888 aa
AA seq
DB search
MTESKKLLLIDGNSVAFRAFYALYNSLNRFTNPDGLHTNAIYGFNTMLDHMLKDVQPTDA
LVAFDAGKTTFRTKKYTDYKGGRAKTPAELTEQMPKIRHLLTARGLKSYDLKDYEADDII
GTLAKEADAADYETVIITGDRDLTQLTSDKTSVAVTVKGVSEVEYYTSAHVQEKLGVTPD
QIIEIKGLRGDTSDNYPGVAGVGPKTAENLIQKYGTIDGVYDNIDDITAKKLKEHLLEDK
DSAFLSRDLATIRRDAPLAIGLDDLAYTGDDTDALVAFYQKMNFQSFLSKLNTDGDGEDV
LGLKPVSFTVLTQDNLAELKTLNDPVSFYLEMPEANYHTSDFAGFVIGSGAKWFVSRDVE
LLQEDAVKSLLTSETLTKNVFDVKRTYVGLNRLGIHLQNVDFDLLLASYLLDTNENSNDL
GKLAFQHQYHEIQTDDEVYGKGAKRAIPDDDQIFFEHLTRKAIAIEQLAQPLFDKLTQNE
QMSLYRDLELPMAYVLAHMEIAGIKVDTDKLSEMGSQFTEQLAQIQQTIYQEAGEEFNIG
SPKQLGHILFETMGLTPIKKTKTGYSTSVDVLEKLAGEAPIVENILKYRQIAKIQSTYIE
GLLKVVHSTDQKAHTRYQQTLTQTGRLSSVDPNLQNIPIRTEEGRRIRQAFVPSHDGWQI
FSSDYSQIELRVLAHMTHDKNLQAAFIDDEDIHASTARRIFRLLPDEEVSPNMRRQAKAA
NFGIVYGISDYGLSQNIGISRKQAHDFIETYFEEYPGVKKYMDDIVQTAKDQGYVETISH
RRRYLPDINARNFAQRSFAERTAMNTPIQGSAADIIKIAMINMEDALKKADLQATMLLQV
HDELIFEAPAEEIPTLEKLVPKVMDSAVKLEIPLKVESQYGNTWYDAK
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgacagaatctaaaaaattgttgttaattgatgggaacagcgtggcctttcgagccttt
tacgcgctctataattcgttgaaccggttcacgaatcccgatggcttgcacactaatgcc
atttatggcttcaacaccatgctggatcacatgttaaaagacgttcagccaactgatgcc
ctggtggcgtttgatgctggtaagacaacgtttcgaacaaagaaatatacagactacaag
ggcggccgggcaaaaacgccagccgagttaacagagcagatgccgaaaattcgtcatctg
ctgacggcacggggactgaagtcgtacgatttaaaggactatgaagccgatgacattatc
ggcacgctggctaaggaagcggatgcggctgattatgaaacagtgatcatcactggagat
cgggatctcacgcaattaacttctgataagacaagcgtggctgtgaccgttaaaggcgtt
agtgaagtcgaatactacacatccgctcacgtgcaggagaaattaggcgtgacgcccgat
caaattattgagatcaagggactgcgcggtgatacgtcggataattatcccggggttgcc
ggtgttggtcctaaaacggctgaaaatctgattcaaaaatatggcaccatcgatggtgtt
tacgacaatattgatgatattacggctaaaaaactcaaggaacatttgcttgaagataag
gattcggcctttttgtcacgcgacctggcgacgattcggcgtgatgcaccgttagccatt
gggttggacgacttagcgtataccggtgatgataccgatgcgttggttgcattttatcaa
aaaatgaatttccaatctttcttgagtaaattaaataccgatggcgacggtgaggatgtg
ttggggttaaagccggtgtcgtttaccgtgctcactcaagacaacttggctgaattgaag
accttaaacgacccagtgtcattttatctggagatgccggaagcaaactatcacacgtct
gactttgccggttttgtgattggcagtggggcgaagtggtttgtcagtcgtgacgttgag
ttgctgcaagaagacgccgttaagtcactactgactagtgaaacgctcacgaaaaatgtg
tttgatgtcaagcggacctacgttgggttgaaccgtcttggcatccatctgcaaaatgtg
gattttgacctattattggcgtcctatttgcttgatacgaatgaaaacagtaacgacctt
ggtaagctggcgtttcaacaccagtaccacgagatccaaacagatgacgaggtgtacggc
aagggcgcaaagcgggccattcctgatgatgaccagatcttttttgagcatctgacccgc
aaagcgattgcgattgagcagctggcacaaccgctttttgataaactgacacaaaatgaa
cagatgtctctttaccgtgatttagaattaccaatggcctatgttttagcccatatggaa
atcgctgggatcaaagtggacaccgataaactcagtgaaatgggcagccagttcacggaa
cagttggcgcaaattcaacagacgatctatcaagaggctggcgaagaatttaacattggc
tcaccaaaacagttgggtcatattttatttgaaacgatgggtctgaccccaatcaagaaa
acgaagacggggtattcaacctcggttgacgtccttgaaaaattagcgggtgaggcaccg
atcgttgaaaacatcttaaagtatcgtcagatcgcaaagattcaatcgacttacatcgag
ggcttgctgaaggtggtccattcaacagatcaaaaggcgcacacgcgttaccagcaaacg
ttgacgcagactgggcgcctgtcttcggtcgatcctaacctgcaaaatattcccattcga
acagaggagggccggcggattcgacaagcctttgtgccgagtcacgatggctggcagatc
ttttcgtctgattactcgcaaattgaactgcgggtacttgcgcatatgacgcatgataag
aacttgcaggcagcctttatcgatgatgaagacattcatgccagcaccgcacggcgaatc
ttccgtctgctgccagacgaggaagtgtccccgaacatgcggcgtcaagctaaagcggct
aacttcggaatcgtttacggtatcagtgactatggcctgtcacaaaacattggcatttcg
cggaagcaagcgcatgactttattgaaacgtacttcgaagagtatcctggcgttaagaaa
tatatggatgacattgtccaaacggcgaaggaccaaggctacgttgaaaccattagccat
cgtcgccgctacttgccagacatcaatgcccgcaactttgcccaacgctcgtttgctgag
cggacggctatgaacacgcccattcaagggagtgctgcggacattattaagattgcgatg
atcaacatggaggatgcactgaaaaaggcggacctccaggccacgatgttgctgcaggtg
catgatgaactgatctttgaggccccggctgaagagatcccaacgcttgaaaaattagtc
ccaaaggtgatggactcagctgtgaaattggaaattccattaaaggttgaatcccaatac
gggaacacttggtatgacgccaagtag
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