Secundilactobacillus paracollinoides: AYR62_08225
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Entry
AYR62_08225 CDS
T04675
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
lpd
Secundilactobacillus paracollinoides
Pathway
lpd03030
DNA replication
lpd03430
Mismatch repair
lpd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AYR62_08225
03430 Mismatch repair
AYR62_08225
03440 Homologous recombination
AYR62_08225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpd03032
]
AYR62_08225
03400 DNA repair and recombination proteins [BR:
lpd03400
]
AYR62_08225
Enzymes [BR:
lpd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AYR62_08225
DNA replication proteins [BR:
lpd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AYR62_08225
DNA repair and recombination proteins [BR:
lpd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AYR62_08225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
RuvB_N
AAA_30
AAA_5
TIP49
AAA_assoc_2
AAA_22
AAA_19
AAA_2
Sigma54_activat
AAA_7
AAA_14
nSTAND3
AAA_16
DnaX_C
Mg_chelatase
RCF1-5-like_lid
DUF815
RNA_helicase
PIF1
TsaE
DUF6779
AAA_18
Motif
Other DBs
NCBI-ProteinID:
ANZ64064
LinkDB
All DBs
Position
complement(1829093..1830874)
Genome browser
AA seq
593 aa
AA seq
DB search
MSYQALYRVWRPQRFDEVIGQSLITQTLKNAIKTHQTSHAYLFAGPRGTGKTSMAKIFAK
AVNCPNQKDGEPCNDCEICKAITQGTLNDVIEIDAASNNGVEEIRDIRDKVKYAPTEAEF
KIYIIDEVHMLSTGAFNALLKTLEEPPANVIFVLATTEPHKIPATIISRTQRFDFKQIQA
KDSLDRMTYILNEKHVTYDEEALKVIAKASEGGMRDALSILDQAISFGDDTVTLDNALLV
TGSVRKKLLVQYLDQVADNDTQQALVTIQDVLADGKDPERFTEDLVNLTRDLLLYQQSPE
LVAEIELDQVDDQFKTLATKLSPQRLYDMIDALNDIQQQMRFTTHEDVYLEVLTVKLAGI
RGQQPVASQPAVSATPADQDVITQLQREVQSLQQTVSALQQQPAGTAPAAVQPQAPAQSK
PAHRAGAFHINLEKIYPILGSATRTALSDLQSNWPELIQYFDSPRKRAMMKIAKPVAASD
RGAVIAFDDSFIVERADDDNSFKDDIENALDRETGHVPDIVFVPTGEWPTIRKNYLKQHK
VHPEGEPEDDSSAAVETQETQSEDQQPENDQMVSEAQQVFGEYISDIIEVKQD
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgagttaccaagccttataccgggtgtggcggccgcagcgatttgacgaagtgatcggt
cagtcgctgatcacccaaacgttaaagaacgcgataaaaacgcatcaaacaagtcatgct
tatttatttgccggcccccgtgggactggtaagacgtccatggcgaaaatttttgcgaag
gctgttaactgtccgaaccaaaaagatggtgagccctgcaacgactgtgagatctgtaaa
gcaatcacgcaggggacacttaacgatgttatcgaaatcgatgcggcttccaacaacggg
gttgaagaaattcgcgacattcgtgataaagtgaagtacgcgccgacggaagccgaattt
aaaatctacattattgatgaagtgcatatgctgtcaacaggggcctttaatgcattgctg
aagacgctggaggaaccaccggcaaacgtgatctttgtgctcgcaacaactgaaccgcac
aagattccagcaaccatcatttctcggacacaacggtttgattttaaacagattcaggcc
aaggatagtctggatcgaatgacctatatcttgaatgaaaaacatgtgacctacgatgaa
gaagcgttgaaagtcattgccaaagcgtccgaaggtgggatgcgggatgcccttagtatc
ctggaccaagccatttcgtttggtgatgataccgtgacgttggacaacgcgctgttagtg
actggttcggtgcgaaaaaaactcctggtgcagtacttggatcaggtggccgataatgac
acgcagcaggctctcgttacgattcaggatgtcctcgctgatgggaaggaccctgagcgg
tttaccgaagatttggttaatttgacccgtgatttgctgctataccagcaatcgccggaa
ttagttgccgagatcgaattggatcaggtcgatgatcaatttaagaccttagccacgaaa
ttgtcaccgcaacggttatacgatatgatcgatgccctgaatgacattcaacaacagatg
cgatttacgactcatgaggacgtttatttggaagtcctcacggtaaaattagctggtatt
agaggtcaacagccggttgccagccaaccagccgtttcagcaactccagctgaccaggac
gtcatcacgcagttgcaacgcgaggttcaaagcctccaacagacggtttcagcgcttcaa
cagcaaccagctggaaccgcaccagctgccgtgcagccacaagcaccggcgcaatctaaa
ccggctcaccgggcgggcgcgttccatattaatttggaaaagatttatccgatccttggt
tcagcaacccggaccgctttatcggacttgcaaagtaattggccggagttgattcagtac
tttgatagtccgcgaaagcgtgccatgatgaagattgcaaaacccgttgcggcaagtgac
cgtggtgcggtgattgccttcgatgacagttttattgtcgagcgggcggatgatgacaac
tcatttaaagacgatattgaaaatgcacttgaccgcgaaacgggtcacgtgccggatatc
gtttttgtcccaactggtgagtggccgacgattcgtaagaattatctgaaacagcacaag
gtgcatccagaaggtgagcctgaggacgattcgtcagcggctgttgagacacaggaaaca
caatcagaagaccagcagccagaaaacgaccaaatggtgagtgaggcacaacaggtcttc
ggtgaatatatcagcgatataatagaagttaaacaagattaa
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