Secundilactobacillus paracollinoides: AYR62_08365
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Entry
AYR62_08365 CDS
T04675
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
lpd
Secundilactobacillus paracollinoides
Brite
KEGG Orthology (KO) [BR:
lpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpd03400
]
AYR62_08365
DNA repair and recombination proteins [BR:
lpd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AYR62_08365
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
DnaB_C
ChlI
ABC_tran
AAA_16
SLFN-g3_helicase
Lon_C
RecA
AAA_22
AAA_24
AAA_30
nSTAND3
AAA_14
NTPase_1
DUF7125
GvpD_P-loop
LacI
AAA_5
AAA
KdpD
AAA_19
NPHP3_N
DZR
ATPase_2
HypA
DUF2642
MCM
CbiA
NACHT
DUF7129
Zeta_toxin
KTI12
Motif
Other DBs
NCBI-ProteinID:
ANZ64088
LinkDB
All DBs
Position
complement(1856301..1857671)
Genome browser
AA seq
456 aa
AA seq
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MAKAKTQFICQNCGYQAPRFLGRCPNCGKWNTLVEEVVESAAAPVSHATVSGTLAKPEKL
AAVSTEKEPRIKTQMAELNRALGGGVVPGSLVLIGGDPGIGKSTLLLQVSGQLSQTGGTV
LYVSGEESANQIKMRANRLSVASDNLYLYPETDMGRIKENIASMKPDYVVIDSVQTMSEP
DIQSAVGSVSQIREVTAELMRIAKTQGVTIFVVGHVTKGGAIAGPKILEHMVDTVLYFEG
DLHHTYRILRAVKNRFGSTNELGIFEMQEDGLQEVKNPSEIFLEERLEDATGSSIVVSME
GTRPILVEIQALITPSVFGNAQRTASGVDRNRVSLIMAVLEKRAIIMLQNQDAYIKAAGG
VKLDEPAIDLALAISIASSYRDQGTNPEECYVGEIGLTGEIRRVNRIESRINEAQKLGFK
KIYVPKNNLKDWTAPTGIEVVGVTTIKQALKLILPK
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaaagcaaaaacgcaatttatttgtcagaattgtgggtaccaagcaccccgattc
ttggggcgttgtcccaactgtggcaagtggaatacgcttgttgaagaagttgttgaatca
gctgccgcaccagtttctcatgcgacggtgtcaggcacgttggcaaagccagaaaaatta
gcagcagtttccaccgagaaggagccgcgaatcaagacccaaatggcggaattaaaccgg
gctttgggtggtggtgtcgtgcctgggtcacttgtattaattggtggtgatcccgggatt
ggtaagtcgacattactattacaggtttccggtcagctaagccagaccggtggcacagtg
ctgtatgtttctggtgaggaaagtgctaaccagatcaagatgcgagcaaatcgattaagt
gtcgcaagtgacaacctttatctctatccggaaacggatatgggacgaatcaaggaaaac
atcgcctcgatgaagccagactacgtggtgatcgattcggtacagactatgtctgaacca
gatattcaatcagccgtcggatcagtgtcgcaaattcgggaagtgacggctgaattgatg
cgaatcgctaaaactcagggtgtgaccatctttgtcgttggtcacgtgaccaagggcggc
gccatcgctggtccaaagatcttagaacatatggtggatacggtgctctactttgagggg
gacttgcaccatacgtaccggatcttacgggccgttaagaaccggtttggctctacaaac
gagttgggcatctttgagatgcaggaagatgggttgcaggaagtgaagaacccgtccgag
attttcttagaggagcgcttggaagatgcgaccgggtcatcgatcgtagtttcgatggaa
gggacccggccgattctggtcgagatccaagcattgatcaccccctctgtttttgggaac
gcgcaacggacagcttcaggtgtcgatcggaaccgggtctcgttgatcatggccgtcctt
gaaaagcgggcaatcatcatgttgcaaaaccaggatgcgtacatcaaggctgccgggggc
gtcaaacttgacgaaccagcgattgacttagcgttagccattagtattgccagttcttat
cgtgatcagggcacgaatccagaggaatgttacgttggtgaaattgggctgacgggtgag
atccgacgggtgaaccgaatcgaaagtcggatcaacgaagcccagaaacttgggtttaag
aagatctacgttcctaagaacaatcttaaggactggacggcaccaactggtatcgaggtg
gtcggcgtcacaacgatcaagcaagcattgaaattgattttaccgaaataa
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