Secundilactobacillus paracollinoides: AYR62_08545
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Entry
AYR62_08545 CDS
T04675
Name
(GenBank) tRNA pseudouridine(38,39,40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
lpd
Secundilactobacillus paracollinoides
Brite
KEGG Orthology (KO) [BR:
lpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lpd03016
]
AYR62_08545
Enzymes [BR:
lpd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
AYR62_08545
Transfer RNA biogenesis [BR:
lpd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AYR62_08545
Prokaryotic type
AYR62_08545
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
ANZ64118
UniProt:
A0A1B2IZD1
LinkDB
All DBs
Position
complement(1903095..1903892)
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AA seq
265 aa
AA seq
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MLRYKVTFAYDGTNFAGFQRQPHMRTVESALTKVVNKMAKQPDPAIVVYGSGRTDAGVHA
LGQVAHFDFPFALPTESMRRGLNSMLPVDMEVLKVEQVSDAFHARYDVSGKRYMYRMDLG
EFRNPFKRNYTGHWKFPVDVALIRQAEQDLIGEHDFTSFVASGSSARTNFRTIYEATCHR
DEANNELVFEFYGNGFLYNQVRIMVGVLVEIGAQTRPVDDIQRLYKLGDRRNARRTVPAS
GLYLKHVYYEGDDPEHPTKLPKHQR
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
attttgagatacaaagtgacatttgcctatgatggcacgaattttgctggctttcagcgg
caaccgcacatgcgtaccgtggaatcggcgctcactaaagtggtcaataaaatggctaaa
caacccgatccagccattgtcgtttacgggtctggccggactgatgctggcgtccatgcg
ttgggtcaggttgcgcactttgattttccctttgctctgccgactgaaagcatgcggcgg
ggcctcaactccatgctgccagtcgatatggaagtccttaaggtcgaacaggtgagcgac
gcctttcacgcccgttacgatgtgtctggcaagcgctacatgtaccggatggatctcggt
gaattccggaacccgtttaaacgcaactacaccggccactggaaattccctgtggacgtt
gccttgattcgtcaggcagaacaggacctgatcggcgaacacgactttaccagttttgtg
gcctcgggctccagtgctcggacaaattttcggacgatttatgaagcgacctgtcaccgt
gatgaggcgaacaatgagttagtctttgaattctatgggaacggttttctctacaatcag
gttcgaattatggttggggtcctagttgaaatcggcgcccaaacgcggccggttgatgac
attcagcggctttacaagcttggtgatcggcgcaatgcgcgtcgcactgttccggccagc
gggctttatctgaaacacgtttactatgagggggatgaccccgaacacccaacaaaatta
ccaaaacatcagcgttaa
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