KEGG   Secundilactobacillus paracollinoides: AYR62_08990
Entry
AYR62_08990       CDS       T04675                                 
Name
(GenBank) hypothetical protein
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
lpd  Secundilactobacillus paracollinoides
Pathway
lpd03420  Nucleotide excision repair
lpd03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lpd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    AYR62_08990
   03430 Mismatch repair
    AYR62_08990
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lpd03400]
    AYR62_08990
Enzymes [BR:lpd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AYR62_08990
DNA repair and recombination proteins [BR:lpd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AYR62_08990
   MMR (mismatch excision repair)
    Other MMR factors
     AYR62_08990
SSDB
Motif
Pfam: UvrD-helicase UvrD_C_2 AAA_19 Viral_helicase1 AAA_30 SLFN-g3_helicase UvrD_C AAA_14 AAA_16 NPHP3_N NACHT
Other DBs
NCBI-ProteinID: ANZ64192
LinkDB
Position
1985520..1987634
AA seq 704 aa
MASIFASEQAHLTKVYHQLEDMRDTLNAQLTANKTQGFATKEQLDQELTLNFDTDIKTME
TYADIEAINHEIDIVNHNHDISTGQLSKVTTLLTQPYFAKVDLKFSADEQPESYYIGTVG
VDDDAGEPLVLDWRSPIAATYYQQDNGPTSYEANGQIIQTVLTGRRQFDIDHDNLRAYFD
TTITIEDPLLRDALSAHNNATMTAITATIQKTQNAIVRAPNDPVMLVNGIAGSGKTSVML
QRVAYLLYQHRETLSPEDIYFFTPSLTFQHYISAVLPNLGETNPISLTWDQFIEDIPDLP
STLAKSETTSRNQLDQLIANLDQVTLTPSDVSPVTLLGNTALNTADILAIDQQFNHLPMG
QQRLKAVQDVIALRCQDFLRTLATDKQTQDTVLSLSPTQQEHYFGHHVDPQTDDQVHQLT
LQYLQQRASTKSQNAKAYQWLNFEALGKRLLHINHLTVAAWLLLKIFLTGYGNQRAKLVL
IDEVQDYSEVQLMVLRHFFSKARFIMLGDENQAITSDKANFDALRSIFNTPQHPVVTYDL
TTSYRSTAEITALFSQLADNAAVIQPTSVQDNGTAPAITVTQNSQDTMTQLQNQLTSFTA
LPGLTAVITNTAQTATALAASLQAFSPTLITSDKPLPTTGLVVLPLDLAKGLEFGNVILP
DATTAEYPATSLARHRLYTAISRATHHVALIAQDTLTPLLGMQG
NT seq 2115 nt   +upstreamnt  +downstreamnt
atggcatcaatctttgcatccgaacaagcacaccttaccaaggtctatcaccaattagaa
gacatgcgtgacacccttaacgctcaattaactgcgaacaaaacacagggttttgcgacc
aaggagcagctggatcaggaactgaccctcaactttgatacggacatcaaaacaatggaa
acctatgctgatattgaagccattaaccatgaaatcgatatcgttaaccataaccacgat
attagtaccggccaactatcaaaggttacaacactgttgacgcaaccttattttgcaaag
gtcgacttgaaattcagcgccgatgagcagccagaatcctactatatcgggactgttggc
gttgatgacgatgctggcgaaccgctcgttttagactggcgatcccccattgcagcgaca
tattaccagcaggataacggcccaactagctacgaagcgaatggccaaatcattcagaca
gtgttgaccggacgtcggcagtttgacattgatcatgacaacctacgcgcctattttgac
accaccattaccattgaagatccgcttttacgcgacgccctatccgcccataataatgcc
accatgacggcaattaccgccacaattcaaaagacacaaaacgccattgtgagagcacca
aatgatcccgtcatgctggttaacgggatcgccggcagtggcaaaacttccgtgatgctc
cagcgggttgcttacctgctctaccaacaccgcgaaacgttatcaccagaagacatttac
ttcttcacccctagtctgacttttcagcactatattagtgcggtcctgccgaacttaggc
gaaacaaatccgattagtctgacatgggatcaatttattgaagatatccctgatttgcca
agcacattagctaaatcggaaacaacgtcgcgaaatcaacttgatcagctcatcgccaac
ctggatcaagtcacattaacgccgagcgatgtttcgccggtaacactactaggaaatact
gcgcttaacaccgctgatattctcgccattgatcagcagttcaaccacctaccaatgggg
cagcagcgattaaaggctgttcaggatgtcattgcgctgcggtgccaagactttctcaga
acgttagcaactgataaacaaactcaggacaccgttttatcgttatcccctacccaacaa
gaacactattttggtcaccacgttgatccacagaccgatgatcaagttcatcagttaacg
cttcagtacctgcaacaacgggcgtctacaaaaagtcaaaacgcgaaagcctatcaatgg
ctaaatttcgaagccctaggtaaacgcttattacacatcaaccatttaactgttgcggcc
tggctcctgctcaagatatttctgacggggtatggcaatcagcgcgcaaaactcgtttta
attgacgaagttcaggactactcagaggtacagctgatggtattgcgccacttcttttcc
aaggcgcgttttatcatgcttggcgatgagaaccaagccatcacatcagataaggccaac
tttgacgcactgcgctcgattttcaacacgccgcaacaccccgttgtcacatatgacctg
acgaccagttaccgatcaaccgctgaaataaccgcgctgtttagccaacttgctgataac
gcagccgtcattcagcccacctctgttcaagataacggaacagctccggcaattaccgtc
actcagaacagtcaggatacaatgacgcaactgcaaaatcagctgaccagttttaccgcc
ctgccaggcttgaccgcagtcataacaaacactgcacaaactgcaacggctctcgcagca
agcctacaagcgttctcaccgaccctgataacatccgacaaaccacttccaacaaccggt
ctcgttgtgttgccgctggacctggctaaggggctggagtttggcaacgtgattttgcca
gatgccaccactgctgagtatccggcaacgtcattggcacggcaccgtctgtacaccgcc
atttcacgggctacgcaccatgtggcactgattgcgcaggatacgttgacaccgctgctt
gggatgcaagggtaa

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