Secundilactobacillus paracollinoides: AYR62_09030
Help
Entry
AYR62_09030 CDS
T04675
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lpd
Secundilactobacillus paracollinoides
Pathway
lpd03420
Nucleotide excision repair
lpd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lpd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AYR62_09030
03430 Mismatch repair
AYR62_09030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpd03400
]
AYR62_09030
Enzymes [BR:
lpd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AYR62_09030
DNA repair and recombination proteins [BR:
lpd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AYR62_09030
MMR (mismatch excision repair)
Other MMR factors
AYR62_09030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
Viral_helicase1
AAA_16
SLFN-g3_helicase
DEAD
PhoH
AAA_30
Catalase_C
NACHT
NPHP3_N
DXP_reductoisom
Motif
Other DBs
NCBI-ProteinID:
ANZ64200
UniProt:
A0A1B2IZ57
LinkDB
All DBs
Position
complement(1997645..1999945)
Genome browser
AA seq
766 aa
AA seq
DB search
MAATIKQQEQAHLDDVVSKIKVAQTKAQTSIDQAETDEKGIRDNFQNDLRLKTDSYAGMM
ETALSVRQQQQLLGERQNSWQHATNELATLKKLEKTPYFARIDFHEAGEPKTETIYIGLA
SFSDEPDRFLVYDWRAPISSVYYDGGLGNVTYLTPDGEQTVDVKLKRQFQIEDGSIKTVF
DTEEAVGDQMLLDALSEKSDTKMKSIVTTIQKEQNQIIRDTKSDLLFVQGAAGSGKTAAV
LQRVAYLLYRYRGKLTSGQVVLFSPNQLFNDYIDQVLPELGEHNMVQMTYYQYAGRRIPK
MAVETLSERFSEDYSDAEKRIDTLKGGLSFFDAVTAYANHLEKENMIFRNINFKGKPFFT
KEKIHEIYYSFNENYRLGNRLDGTREQLIKMLNRRISSEMRTKWVEETVQDLSKEEMDKL
FGDQPREFDSADKEFQFLARKIVMQAFQPIRQAIVRNRFLSINAQFIHMLRSLPQIIDLE
KAGISKDDWKASVNRAIDRIKAGKMTLSNVSAYLYLFDKMTGKKGERDIRYVFIDEVQDY
TPFQLAFLKFSFPRARFTLLGDLNQAIFTKENSHTLLSELSTMFDPEKTRVVQLTQSYRS
TQQITDFTRHILVNGEAVTAFDRDGQIPTVLVASDDHAALAATIKQIQQNNDDHETTAII
GKTLKQCRALSSQLQEAGVRATLIQSENQRLASGVIIVPSFLAKGLEFDAVIVWDASDRN
YFEEDDRQLLYTICSRAMHRLTVIAGGKLSRLFETVPTDEYELSES
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgacaattaagcaacaagaacaagcccatcttgatgatgttgtatcaaagatc
aaggtggcccaaaccaaggcacaaacgtcgatcgatcaagctgaaaccgatgaaaagggc
attcgcgataacttccaaaatgacctgcgactcaagacagattcgtacgccggaatgatg
gaaacggctttgtccgttcgccagcagcaacaactgttaggtgaacggcaaaatagctgg
cagcatgcgacgaatgagttggccacgttaaagaagttggaaaaaacgccgtacttcgcg
cgaatcgatttccacgaggctggtgagcccaaaacggagacaatctacatcggtctcgca
tcgttttcagacgaaccggatcgttttctagtatacgattggcgggccccgatttctagt
gtttactacgatggcggcctggggaacgtgacttatttgacccccgatggtgagcagacg
gtagacgtgaagctcaaacgacagttccagatcgaagatggcagcattaagaccgtgttt
gatactgaagaagcggttggcgaccaaatgttgttggatgcgctgagcgaaaagtcggac
accaagatgaagtccattgtgaccaccattcaaaaggaacaaaaccaaattatccgggat
accaagtcggacctgttattcgtgcagggcgcggctggttccgggaaaacggccgcggtg
ttacagcgggtggcctatctgctgtaccggtatcgcggtaaattaacttctggtcaggtg
gtgctattctcgcctaaccaactctttaacgactatattgatcaggtgctgcctgaatta
ggcgagcacaatatggttcaaatgacgtactaccagtatgctggtcgacggatcccaaag
atggctgttgaaacgctgtccgaacggtttagcgaggactattccgatgccgaaaaacga
atcgatacgctgaagggtggcctgtcattctttgatgctgttaccgcctatgccaaccac
cttgaaaaagagaacatgatctttagaaacattaattttaaaggcaagccgttttttacc
aaggaaaagattcatgagatctactatagtttcaatgaaaattatcggctgggtaaccgc
ttagacgggacgcgcgaacagttgatcaagatgctgaaccggcgaatcagttcggaaatg
cggaccaagtgggtcgaagagactgttcaggacttgagcaaagaagaaatggacaagtta
tttggtgaccagccgcgcgaattcgattccgctgataaggagtttcaattcttggcacgt
aagatcgtcatgcaggcgttccagccgattcgtcaagctattgttcggaaccggttctta
agcatcaatgcccaatttatccacatgctgcgcagtttaccgcagatcatcgacctcgaa
aaagcgggcatcagtaaggatgattggaaggcaagtgtcaaccgggcaattgaccggatc
aaagccggcaagatgacgttgagcaatgtgtcagcctacctatacttgtttgataaaatg
actgggaaaaagggcgaacgcgacattcggtacgtcttcattgatgaagtacaggactac
acgccgttccagttggcatttctgaaatttagtttccctcgggcgcggttcacgttgctt
ggcgatttaaaccaggccatttttaccaaggaaaactcgcacacgttactcagtgaattg
agtaccatgttcgatcctgaaaagacacgggttgtgcaattgacacagtcgtatcggtca
acccagcagatcaccgactttacccgacacattttagtgaacggggaagctgtgactgcc
tttgaccgggatggtcaaatcccaacagttctcgtggcttcggatgatcacgctgcgtta
gctgctacgatcaagcaaattcaacaaaacaatgatgaccatgaaacaacggccatcatt
ggcaaaacgttgaaacaatgtcgtgcgttgtcttctcagttgcaggaagctggtgttcgc
gctaccctgattcaatcagaaaaccaacgattagcctcaggtgtgatcattgtgccatcc
ttcttagccaaggggctcgagtttgacgctgtaatcgtctgggacgcttctgatcgtaat
tactttgaggaagacgaccggcaactgttgtatacgatttgttcacgggcaatgcaccgg
ctgacggtgattgctggcggcaagttgtcgcggttgtttgagacggtgccaacggatgaa
tatgaactaagtgagtcataa
DBGET
integrated database retrieval system
