Secundilactobacillus paracollinoides: AYR62_10005
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Entry
AYR62_10005 CDS
T04675
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
lpd
Secundilactobacillus paracollinoides
Pathway
lpd00300
Lysine biosynthesis
lpd00470
D-Amino acid metabolism
lpd01100
Metabolic pathways
lpd01110
Biosynthesis of secondary metabolites
lpd01120
Microbial metabolism in diverse environments
lpd01230
Biosynthesis of amino acids
Module
lpd_M00525
Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
lpd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AYR62_10005
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AYR62_10005
Enzymes [BR:
lpd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
AYR62_10005
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
QRPTase_C
Motif
Other DBs
NCBI-ProteinID:
ANZ64377
LinkDB
All DBs
Position
complement(2216888..2218201)
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AA seq
437 aa
AA seq
DB search
MSEQVSNQQINDAGHLTIGGVDALKLAQQYQTPLAVYDVSKIRDQIRRFKSVFEDNGVDY
AVTYASKAFATIAMYQVVDQEGAHIDVVSGGELYTALQAHFPAANISFHGNNKSYDELEM
AIENNVGTIVLDNFHEIEQLSDVLEKHDASVQVMMRITPGISAHTHEYIQTGQEDSKFGF
DLKTGLADKALQQVLANKRMNMIGIHAHIGSQIFELNGFQMAAEKLVDIAAEWHTKCGYQ
PQVINVGGGFGIRYTKDDNPLAPEAFVDAIVKTIKQSAADKGLTMPAVWIEPGRSIAGPA
GYTLYTVGGRKDVDGLTSYLTVDGGMGDNIRPALYQAEYEAVLASDPFAKTTETVHLAGK
YCESGDILIDQAHLPATKPGDVLAMLDTGAYGYSMASNYNRNGRPAVVFVENGKSQVVVK
RESYADMTRLDQSYDPE
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaacaagtatcaaaccaacagattaacgatgcaggacatttaaccatcggcggc
gtggatgcactgaaattagctcagcaataccaaacgccgttagcagtgtacgatgtgtca
aagattcgcgaccagatccgccggtttaaatccgtgtttgaggacaacggcgtcgactac
gctgtgacctatgccagtaaggcgttcgcaaccattgccatgtatcaagtggtcgaccaa
gaaggcgcccacatcgacgtggtgtcaggcggcgaactttacacagccttgcaagcgcac
tttccggccgctaacatcagtttccatggcaacaacaagtcctatgatgaacttgaaatg
gccattgaaaataacgtcggtaccattgtgctggataacttccatgaaattgagcaactc
agtgacgtgttggagaaacacgatgccagcgttcaggttatgatgcgcatcaccccaggg
atttccgcccacacccacgaatacattcaaacgggtcaggaggattccaagtttggcttt
gaccttaaaacaggcttggcagacaaggccttgcaacaggtgcttgcgaacaagcggatg
aacatgatcgggattcacgcccacatcggttcccaaatttttgaactgaacggcttccaa
atggcagctgaaaaattagttgacattgctgccgaatggcacaccaagtgtgggtatcaa
ccacaggtaatcaacgtgggtggcggcttcggcattcgctacaccaaggatgacaatccg
ttagcacccgaagcgtttgtcgatgccatcgtcaagacaatcaaacaaagtgccgccgat
aagggattaacgatgccagcggtttggatcgaaccgggccgttcaattgccggtcctgcc
ggttacaccctttacacagtgggcggacgcaaggatgttgacggtctgacctcgtatctg
acggttgacggcggcatgggcgataacatccgtcccgcgctgtatcaagcggaatacgaa
gccgttttggctagtgatccgttcgcgaagacgaccgaaacggtgcacctggccggtaag
tactgtgagtcaggcgatatcctgatcgaccaagcacacctgccagccaccaagccgggt
gacgtgctcgccatgttggataccggtgcttacggttactcgatggcctccaactacaac
cgaaatggtcggccagccgttgtgtttgtcgaaaatggcaagtcgcaggttgttgttaaa
cgtgagtcttacgctgatatgacgcggttagaccaatcctacgatcctgaataa
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