Secundilactobacillus paracollinoides: AYR62_14395
Help
Entry
AYR62_14395 CDS
T04675
Name
(GenBank) ATP-dependent helicase
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
lpd
Secundilactobacillus paracollinoides
Brite
KEGG Orthology (KO) [BR:
lpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpd03400
]
AYR62_14395
Enzymes [BR:
lpd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AYR62_14395
DNA repair and recombination proteins [BR:
lpd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
AYR62_14395
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
ANZ65153
LinkDB
All DBs
Position
3208374..3211943
Genome browser
AA seq
1189 aa
AA seq
DB search
MSLQFIIGPASVDHQAELLNALTTSLEAHPGDQFYYIVPNHIKFESEVQILDRLAQQAGK
QDTGYAQSAVQVLSMTRLAWFFMKNTPDYQLPRVSEAGLNMLVYQAIIDHRSELKLFAGE
ADRPGFISLLTRQLMELKTGQVSAFDLGQVAEKITGSSADLDAKLHDLVLIYDNFDAAMA
NKYVANTDLLNQLSDYLKNRDLSHTHFYFDGFSQTQFSAQEMALLTTLMQGADEVKVALT
LDHGTPTPETINEQSLFFQPSRTYLRLYQTARSLSVPVMTDVLAKQSRVAPDLQRLETYW
QKSATGLGRPQPETLSTADSIQIIQADNRYAEVARVAAMIRQLVAEKGYRYADFLIVTRH
LDKYQNVLGPIMSAQEISYFSDVSQFMADHPLVELISALFEVKRRHYQYADLMRLLKTEL
LLPKTDDGQSMSVLKFRDALFKTENWVLKMGYQGGKWLQKEDWPYARLRTDDLGTQTSAD
DTVGQQINGIRHFVRDTLPPFFKRLDQAQNGREAAQILVRFLTNAGVVDQLMSWRDQAID
RGDLITAGQPEQTWNTFCDLLDEYVTILGDRQFVSDDFLALLLAGFEGANYSQIPSTLDQ
VVISESGIIQMNNRKITFMIGATDKVMPDNTLPTRLLNDQDRQQLVLPEGEYLGDTGVMT
LQGEPYLNYLAFMTPSERLIFTYPLSEDGESQNQISPYVAQIQQHFNLTIEHHAATPQAD
DQTLRPYLGAKRATLRHLVQAANNSRENNHALSPSWQYVYHVLDQDAGTHDLTEKLMGSI
AYRNQPVQLTPDIVDGLYSTTINSSISKLEEFYQNQYAYFLKYGLHLQERDAFELSPANT
GEFFHASLDMLMKRVNAEHIDLTALDAQQLTQLVNEITTAVLDDPMNLQYAILNSSHRMQ
YIKRQLIALIQQTARAFHEQGKYTPMRAKQTEVMFGHIGAENGLPALKFDLPHEKKVQVR
GKIDRIDTMKVENSNQYVGVVDYKSSAHKVDLNDIYHGIAMQMMTYLDVVQRNMALLTDD
PDAELAGALYLHLKNPTLAPNDLKTDLMSAILSKEQYKGLLVNDDNLLQHLEPDRDSNPA
SVYPYAYTKSGSLKKNVGTIVTADELKDLLSFTEMKITDAANAIFDGHLDLNPVKYPNGR
TAMQYSPYKAIMQFDPMLPENDYRLLTADRDKQVILQRMQEELKQRGLH
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttcaatttattatcgggccggccagcgtggaccatcaggctgagttgctaaat
gcgcttacgaccagtcttgaagcccatccgggcgaccaattttactacattgtacctaac
catattaaattcgaatctgaagttcagattcttgaccgcttggcgcaacaggccggaaag
caagatactggctacgcacagtctgctgttcaagtgctttcgatgacacgacttgcctgg
ttctttatgaaaaatacgcctgactatcagttgccacgagtctctgaagctgggttgaat
atgctggtgtaccaagccattattgaccaccgttcggaattaaaactttttgcgggggag
gctgatcggccaggatttatcagtttattgacgcgtcaattaatggagctgaagacgggg
caggtcagtgcgtttgaccttggccaggtggccgagaagatcacggggtcaagtgccgac
ttggatgccaagctgcatgatctcgttttgatttatgataattttgatgccgcaatggca
aacaagtacgttgcgaatactgaccttttaaatcaactgagtgactaccttaaaaatcgt
gacctgtcgcacacgcatttctattttgacgggttttctcagacccagttctcagcccaa
gaaatggcattgctgaccacactcatgcagggtgccgatgaagtcaaagtggccctgact
ctggatcatggaacaccgacgccggaaacgataaacgagcagagtctcttttttcagccg
tcacggacgtatcttcgactgtatcaaaccgcacgtagtttgagcgttccggtgatgacc
gatgtgctcgcgaaacaatcacgagttgcaccagatctgcagcgattggagacctattgg
caaaaaagtgcgaccggccttggccgaccacagccagaaaccttatcaacggcggacagt
attcaaatcattcaggcagacaatcgttatgcggaagttgcccgggtggcggcgatgatc
agacaactggttgccgaaaagggctaccgctacgccgactttttgatcgtgacccgacac
ttggataagtatcaaaacgtgctgggccccattatgagtgcccaagaaatttcctacttt
agtgatgtgtcgcaattcatggcagatcacccgttggttgagttgatctcggctctattt
gaggtgaagcggcggcattaccagtatgctgatttaatgcggttgttgaagaccgaactt
ttgctgccaaagaccgatgatggtcaatcgatgagtgttcttaagtttcgtgacgccttg
ttcaaaactgaaaattgggttttgaaaatggggtatcagggtggcaaatggctgcaaaag
gaagactggccgtacgcgagattacgcacggatgaccttgggacacagaccagtgctgat
gacactgttggtcagcagatcaatggtattcggcactttgttcgcgacacactgccacca
tttttcaaacgacttgatcaagcacagaatgggcgggaagcggctcaaattttggtgcgc
tttttgaccaatgctggggttgtagatcagttgatgtcctggcgagatcaggcgattgac
aggggggatctgattaccgctgggcagcctgaacagacttggaatacattttgcgacttg
ctggacgagtacgtcaccattctgggtgaccgtcagtttgtgtctgacgactttttagca
ctactgttggcaggcttcgagggtgccaattactcgcaaattccgtcaacgctggatcaa
gtcgtgatctccgaaagcgggatcattcagatgaataaccgtaaaatcactttcatgatc
ggtgcgaccgataaagtgatgccggataatacgttaccgactcggttgttgaatgaccaa
gaccggcagcagctggtacttcctgaaggtgaatacttgggcgataccggggtcatgaca
cttcagggtgaaccctatttgaactatctcgcgttcatgacaccgagcgaacggctgatc
tttacctatccgttgagtgaagatggggaaagtcaaaaccagatcagtccttacgttgcc
cagattcagcaacactttaacctgacgattgaacatcatgcagcgactccacaggcagat
gaccaaacgcttcgaccgtacttgggagctaaacgggcaacactgcggcacctagttcag
gcagcaaataacagtcgtgaaaataatcacgcgttatccccaagctggcagtatgtctac
catgttctggatcaagatgccgggacacatgatctgaccgagaaattaatgggcagcatt
gcgtaccgcaaccaaccagtacagttaacaccagatatcgttgacgggctctattccaca
acaatcaatagttcaatttcaaaactggaggagttttaccaaaaccagtacgcttacttt
ttgaagtatggccttcatttacaggagcgggacgcctttgaactatcacctgccaacact
ggtgaatttttccatgcttcgttggatatgttgatgaaacgggtgaatgcggaacatatt
gatctgacggcacttgatgcccagcaactgacacagttggtgaacgaaattactactgct
gtgctcgatgatcccatgaatttacaatatgccattctcaatagcagtcaccggatgcaa
tatattaagcgtcaattaatcgccctgattcagcaaacagctcgcgccttccatgaacag
gggaagtatacaccgatgcgcgccaagcaaacggaagtgatgttcgggcatattggtgcg
gaaaacggtctgcctgcactaaagtttgacctccctcatgaaaagaaggttcaggtccgt
gggaaaattgaccggatcgatacgatgaaagttgaaaacagcaaccagtacgttggcgtc
gtggattataagtccagtgctcataaggttgacctcaacgatatctaccacggtatcgct
atgcagatgatgacttatttggatgtggtgcaacgcaacatggcgctgctgacagatgat
ccagatgctgagctggccggtgcgttgtacctgcatttgaagaatccaacgctggcaccc
aacgacttaaaaacggatctgatgtcggccattttgtctaaggaacagtacaagggactg
ctggttaacgatgataacctgttacagcacctggaaccggaccgcgactcgaacccggcg
agtgtttatccttacgcttacaccaaatcggggagtttgaagaaaaatgttgggaccatc
gttacggcggatgagctgaaagatttgctgtcgtttaccgaaatgaagatcacggatgcc
gccaacgctatttttgacgggcatctggatctcaatcctgtgaaatatccgaacgggcgc
acagcaatgcagtactcaccatacaaggccattatgcaatttgatccgatgctgccagaa
aacgactaccgcttattgacagctgaccgggacaaacaagtgatcctacaacggatgcaa
gaggagttgaaacaacgtggactacactaa
DBGET
integrated database retrieval system
