Secundilactobacillus paracollinoides: AYR62_14400
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Entry
AYR62_14400 CDS
T04675
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
lpd
Secundilactobacillus paracollinoides
Brite
KEGG Orthology (KO) [BR:
lpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpd03400
]
AYR62_14400
Enzymes [BR:
lpd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AYR62_14400
DNA repair and recombination proteins [BR:
lpd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
AYR62_14400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
PDDEXK_1
AAA_12
DEAD
ResIII
DUF6368
NPHP3_N
AvrB_AvrC
DUF4372
Motif
Other DBs
NCBI-ProteinID:
ANZ65154
UniProt:
A0A1B2IX61
LinkDB
All DBs
Position
3211930..3215619
Genome browser
AA seq
1229 aa
AA seq
DB search
MDYTKSQQAVLDTHHTNLLVSASAGSGKTRVLVDRVINMILDHESIDHLLIVTFTRAAAK
EMKDRIESALKQQINQVDAEERRYLTRQLALLPVAAISTMDAFCQQIVERYYYLINLDPV
FRILGDASESALLKEEVWDDVREDLYANDEDGKFQELVTNFSSDRSDDGLTTVVDDVFRF
MGAKPDPDDWLAHLGDNYAVDQDLMTAPIVKTRLLPIIQDKLASAKSELTAAKRLAADEQ
VDQVVTYMDSLLAQLDELHSDATSWDAFRAQVEAFDWGRLPSIRKTNEAYDGYQLVKDQV
ASHKKAAKEDQLDEILSFMPQDEIVTIATMHHSEQIVRQLATVVQTFSDAYAKEKRRRHV
LEFSDVEHFALQILEAQTDEAKAVRQQLQTDYHEIMVDEYQDTNELQEAIVTSLAQDDPG
NLFMVGDIKQSIYRFRLAEPQLFLTKFQRYQADPTAGKEITLAENFRSMANVDNFTNLIF
TQIMDEKLGQISYSGSAKLVYGASYPTSLPNAASLLIYETEAPTEKAPGDVPDKDAGQVT
VVAQQIAELMHDQTTIWDRRAQAMRPLTYQDIAIIAPTKTNNLEIQDQFGRLGIPVQIND
AQSYFKTTEIQIMMSLLQLIDNPYQDIPLAAVLRSPIVGLNENELAFLRITDKTDDYFSA
LQHFLINYEADYAGQAYADSLQPKVAHFIEQLTTFQTIARKQPLATLIWQIYQQTGFLDY
VAGMPAGVQRQANLHALYERAADYERNGFKGLFQFVRFIERMQNNDQDLAEAAAETTDNA
VQVMTIHGSKGLEFPVVFLLDTSRNFNMQDTTERALLNNQLGIGIDDFQPDTRLVVPSIP
KMVIKETTKQESLAEEMRKLYVALTRAEQRLYIVGACKQQADLLKTWQAAAQDQQLVLNP
TLRGKTHNYLDWIGMSLVRHPKFQATDAQPLQALADDPTDFDITFITPDRLTEMAAYQKP
ITGSTWLTDLKEQLKTTDFASVDVDQIDQVLDMQYGFEPEMRTTAYQSVSEIKRLFEDPD
MLQLGQYNPQWQQSHGNRFVTSDFKQPAFLQTVTAPTSAEVGTATHLVLQELSLTQPITL
AAIDQQIQTLVADQVMAEPIAAQIDREHVLRLFDTELGQAIVAHGTRTQRETPFSLLLPA
HQVFEDLHDEQAKILIHGIIDGYFEDEDGITLFDYKTDHVAPGESGIAKIKDRYSGQLNL
YAQALSDMTGKPVVRKYLFLLATGEAVAM
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
gtggactacactaaaagccaacaagcggtacttgacacccaccacacgaatctgctggtt
tcggcatcggccggttccggtaaaacgcgggtgcttgtggaccgcgtcattaacatgatc
cttgatcacgaaagtatcgatcatttgctgattgtcacctttactcgagcggcggctaaa
gaaatgaaggatcgaatcgaatcggcattaaaacaacagatcaaccaggtcgacgctgaa
gaacgccggtatctcacccgtcaactggcacttttaccagtggcggccatcagtaccatg
gatgcattttgtcagcagatcgttgagcgttattactacctgatcaatttagatccggtc
tttcgaattcttggtgatgcttcagaaagtgcattgttaaaagaagaagtctgggacgac
gttcgtgaagacctgtatgccaacgatgaggacggcaagtttcaagaactggtgacgaat
ttttccagcgaccgttctgacgatgggctaacgacagtcgttgacgacgtttttcggttc
atgggtgctaaaccggatcctgatgactggttagctcatcttggcgacaactatgcggtc
gatcaggacctcatgacagcaccaatcgttaaaacacggctgttgccaattattcaagac
aagctggcaagcgctaaatcagagctgacggctgctaaaagattagccgcggatgagcag
gttgaccaagtcgtgacctacatggacagcttgttggcacaactggatgagctgcactca
gatgcaacgtcttgggatgcgtttcgtgcccaggttgaagcattcgactggggccggttg
ccgagtattcgaaaaacaaatgaggcttacgacgggtaccagctcgttaaagatcaggtt
gccagccataagaaagcggctaaggaagatcagttggatgagatcttatcgttcatgccg
caggatgagattgtgacgattgcgacgatgcaccatagtgagcagatcgtccgccagttg
gcaacggtcgttcagacgtttagcgacgcctatgccaaagaaaaacgccggcgtcatgtc
ctagagtttagcgatgttgaacactttgcactgcagatcttggaagctcaaacagatgag
gccaaagcggttcgtcagcaattgcaaacggactaccacgaaatcatggttgatgagtat
caggacaccaatgaattgcaggaagctatcgtgacgtctcttgctcaggatgaccccggg
aacctcttcatggtgggcgatatcaaacaatccatttaccgtttccgattagcggaaccg
caactgtttttaacaaagttccagcgctatcaggccgacccgacagccggtaaggagatc
acgttggcggaaaatttccggtccatggcaaacgtggacaattttacgaacctgatcttt
acccagatcatggatgaaaaactcggtcaaatcagctatagcggctctgctaaactcgtg
tacggcgcatcatatccgacgagtttgccgaacgcggcatcactgctgatatacgaaact
gaggcaccgacggaaaaggcacctggtgacgtacctgataaggacgctggccaggtcacc
gttgtcgcccagcagattgctgaattaatgcatgatcaaacgactatctgggatcggcgg
gcacaagccatgcgcccactgacctaccaagacattgcgattattgcaccgacaaaaaca
aacaatttggagattcaagaccagtttggccgacttgggattcctgtccagatcaatgac
gcccagagttactttaaaaccactgagattcagatcatgatgtcgctgttgcagctgatc
gataacccttaccaggatattccactggcagcagtgttacggtcacccatcgttggcttg
aacgaaaatgagttggccttcctcagaattaccgataagacggacgattatttctcagcc
ttgcaacactttttgattaactacgaagccgattatgcggggcaggcatacgctgacagt
ctgcaacctaaagtcgcccattttattgaacagctgacgacgtttcagacaattgcgcgc
aagcagcccttggcgaccctcatttggcagatctatcagcagaccggttttctggactac
gttgctgggatgccagctggggtacagcgacaagctaatctgcacgccctgtatgaacgg
gcggccgactatgagcgcaacggatttaaaggactctttcaattcgttcggttcattgag
cggatgcaaaacaacgatcaggacctggcagaagcggcagcggagaccaccgataacgct
gtccaggttatgacgatccacgggagcaaaggtcttgaattcccagtggtctttctcctc
gacacgtcacgcaatttcaacatgcaggacactacggaacgcgcactgttaaataaccaa
ctgggtatcgggatcgatgattttcagccagatacgcgactggtggtgccgtccattcct
aaaatggtgatcaaagaaacaactaagcaggaatcactcgcggaggaaatgcggaaactg
tacgtggcgctgacccgggctgagcagcggttgtacattgttggcgcctgcaaacaacag
gctgatttattaaagacctggcaggcggccgcccaggaccagcagctggtcttgaaccca
acactgcgggggaagacgcataactatttggactggatcgggatgtcgctggttcgccac
cctaagtttcaggcgactgatgcacaaccgcttcaggcactggctgacgatccaactgac
tttgatatcacgtttatcaccccggatagactgactgaaatggcagcctaccaaaagccg
attactggcagtacctggctaactgatttaaaagaacaactgaaaaccaccgattttgcg
agtgtggacgtcgaccagatcgaccaggttttggacatgcagtatgggtttgaaccagag
atgcggacgacggcgtaccagtcagtttcagaaattaaacgcctctttgaagatcccgat
atgttgcaattagggcagtataacccccagtggcagcaatcacacgggaaccggttcgtg
acgagtgactttaaacagccagcctttctgcagacggtgacggcgcctacttcggctgaa
gtggggacagcgacccatttggttttgcaggaattatcgttgacacagcccattacgttg
gcggccattgaccagcaaattcaaaccttagttgctgatcaggtgatggccgaaccgatt
gcggcacaaattgaccgtgagcatgtgttgcggctgtttgataccgagttgggacaagca
atcgtcgcccatggcactcggacgcagcgagaaacaccgttttcactactgctacctgct
caccaagtctttgaggatctgcacgatgagcaggctaaaatcctgattcatgggatcatt
gacgggtatttcgaagatgaagacgggattacgctgtttgactataagacggatcacgtg
gccccaggtgaaagcggtattgcgaagatcaaggatcgctattcaggtcagctaaattta
tacgcgcaggccttgtcggatatgacgggcaagccggtggtcagaaagtacctgttcttg
ctggcgacgggagaagcggtggcgatgtag
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