Legionella pneumophila subsp. pneumophila ATCC 43290 (serogroup 12): lp12_0562
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Entry
lp12_0562 CDS
T01726
Name
(GenBank) formamidopyrimidine DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
lpe
Legionella pneumophila subsp. pneumophila ATCC 43290 (serogroup 12)
Pathway
lpe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lpe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
lp12_0562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpe03400
]
lp12_0562
Enzymes [BR:
lpe01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
lp12_0562
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
lp12_0562
DNA repair and recombination proteins [BR:
lpe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
lp12_0562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
zf-C3HC4_3
MpsC
Motif
Other DBs
NCBI-ProteinID:
AEW50837
LinkDB
All DBs
Position
complement(600825..601649)
Genome browser
AA seq
274 aa
AA seq
DB search
MPELPEVETTKQGIKPHLEGRMITAVQVRNRKLRLPVPLNLNELCQGKHITAITRRGKYI
LLHMDKGYLLIHLGMSGHLRIVSQTANPQKHDHVDLHINNGLALRFCDPRRFGLFIYIDE
NPYQHPLLAHLGPEPLSDDFNSEYLLRKAANKSQSIKSFIMDSQIVVGIGNIYAAESLFL
AKIHPNTSAKKITTEEFNSLTGHIKKILESAIEAGGTTLRDFYSSDGKPGYFRFALKVYG
RKNLPCLVCENKIETVVIAGRHSAFCPHCQPIIT
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacccgaagtcgaaacaacaaagcaaggtattaaaccccatcttgaaggc
cgtatgattaccgcagtgcaagtgcgtaatcgaaaacttagattaccagtacctctaaac
ctgaatgaattatgccaaggaaagcatataacagctattacccgtagaggaaaatacatc
ttacttcatatggataaaggttatcttctcatccatcttggaatgtccggacatttgcgt
atcgtatcccagacagcaaatcctcaaaaacatgatcatgttgatctgcacattaataat
gggcttgctctcagattctgcgatcctagaagatttggcttatttatttacattgatgaa
aatccttaccaacacccactgctggcacatttaggcccggaacctctgtctgatgacttt
aatagcgagtacttattacgtaaagctgcgaataaatcgcaatccatcaagtcatttatt
atggatagtcaaattgttgtcgggatagggaatatttatgcggcagagagtctttttctt
gccaaaatccatccaaatacctctgcaaaaaagataactacagaagaattcaattctctg
actggtcacatcaaaaagatacttgaatctgccatagaggctggagggacgacacttcgt
gatttctattcttctgatggtaaaccagggtactttcgttttgctttaaaggtttatggc
aggaaaaatctcccctgtttggtatgtgaaaataaaatagaaactgtcgtgattgccggg
cgccactccgcattttgcccacattgccagccaatcattacataa
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