Legionella pneumophila subsp. pneumophila ATCC 43290 (serogroup 12): lp12_0889
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Entry
lp12_0889 CDS
T01726
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lpe
Legionella pneumophila subsp. pneumophila ATCC 43290 (serogroup 12)
Pathway
lpe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lpe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
lp12_0889
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpe03019
]
lp12_0889
03400 DNA repair and recombination proteins [BR:
lpe03400
]
lp12_0889
Enzymes [BR:
lpe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
lp12_0889
Messenger RNA biogenesis [BR:
lpe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
lp12_0889
DNA repair and recombination proteins [BR:
lpe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
lp12_0889
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HEM4
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
AEW51159
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All DBs
Position
complement(959283..961109)
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AA seq
608 aa
AA seq
DB search
MGTLAQPSFINPNALAVLKKYFGFDSFRPPQEKIIEDVISGEDVLVLMPTGGGKSLCYQI
PAIVRPGVGIVVSPLIALMEDQVTALKLQGIRAAYYNSSLTAEDARNVLNQLHHNELDLL
YIAPERLISTSFLDRLSECTISLFAIDEAHCISQWGHDFRPEYACLGLLKTNFPDIPMIA
LTATADKQTREDIVTKLNYQPKKYVVSFNRPNIHYKVVPKTNAVKQLNLFLQSDTQQSGI
IYCGTRHTVEHLTAKLQELGFKARAYHAGLPHAERREVQNLFRYDRIDIVVATIAFGMGI
DKPNVRFVVHHDLPKSIEGYYQETGRAGRDGLPAKALLLYDAADSARLRSWIMNIPLEEQ
RHIETNKLNHMLAFAEASHCRRQILLRYFDEPSHTECKNCDVCDNPPQTADATEDAQKFL
SCIYRLKQSYGLTHTIDVLRGSLSEKIKQSGHEHLSTFGIGKEKSANYWKHLAWQLIHKD
YCLQDMNHFNVLRLTPKAIPLLKGVESISLTIPNNDLNSSKKKGKQNPSFKPESNPLFEK
LRALRRQLADEENKPPFMIFSDATLHEMAQLKPKNSKQLLNVSGVGQHKLARYGHYFLEA
LNEFSEVE
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgggaactttagcgcaaccatcttttataaatccaaacgcattggctgttttaaaaaaa
tattttggatttgattccttcagacctcctcaggaaaaaataattgaggatgtcatttct
ggggaagatgtactggttttgatgcctactggagggggaaaatcgctttgctatcaaatt
ccagccattgtccgccctggtgttggcattgtagtatctcctttaatcgcgttaatggaa
gatcaagtaaccgctctcaaactgcagggtattcgtgcggcttactacaactcatcctta
accgccgaagacgctagaaatgtattaaatcaattacatcataatgaattggatttactc
tatattgctccagaacgtcttattagtacctcgtttctggatcgactgtcagaatgtact
atctctttatttgctatcgatgaagcacactgtatttcacaatggggacatgattttcga
cctgaatacgcctgtttaggtttactgaaaactaactttcctgacattcccatgattgct
ctgacagctactgccgataagcaaacacgtgaggatattgttaccaagttgaattatcaa
cccaaaaaatacgttgtttcattcaatcgaccgaatatccattacaaagtagttcctaaa
acaaatgcagtgaagcaattaaatctgtttttacaatctgatacccagcaatctggaatt
atttattgtggaacccggcatacagtcgaacatcttacagcgaaattacaagaacttgga
tttaaagcacgcgcttatcatgcaggcctgcctcatgcggagcggcgtgaggtgcaaaac
cttttcagatacgatcgcattgatattgtggtagctactattgcttttggaatgggtatt
gacaagcctaatgttcgctttgttgttcaccatgatttacccaaaagcatcgaaggttac
tatcaagaaacaggtcgtgcaggacgtgacggattaccggccaaggcccttcttctttat
gatgctgcggatagtgcccgtttgcggtcctggatcatgaacattcctcttgaggagcaa
agacatatagaaaccaataaattaaatcatatgcttgcttttgctgaagcgtcgcattgt
cgtcgtcaaattttattacgctattttgatgaaccttctcatacagaatgtaaaaactgt
gatgtttgcgataacccaccgcaaacagccgatgcaacagaagatgcgcaaaaattttta
tcgtgtatttatcgattaaaacaaagctatggtttaactcatactattgatgtcctgaga
ggtagtttatctgaaaaaatcaagcagtctgggcatgagcatttaagtacctttggaatt
gggaaggagaaatctgccaattattggaagcatcttgcctggcaattaattcataaggat
tattgtttacaggacatgaatcattttaatgtgttacgcttgaccccaaaagcgattccc
ctcctaaaaggtgtagagagtatttcattaaccatccctaacaatgacctgaatagcagt
aaaaagaaaggcaagcagaatccttcctttaaacctgaaagtaacccattatttgaaaag
cttcgtgcgttaagacgtcagttagccgatgaagaaaacaaaccaccatttatgatattc
agtgatgctacattacatgaaatggcccaattaaaacccaaaaacagtaagcaactactg
aatgtatcaggggttgggcaacataaattagctcgttatggccattattttctcgaagcc
ttaaacgaattttcagaagtcgagtga
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