Legionella pneumophila subsp. pneumophila ATCC 43290 (serogroup 12): lp12_2338
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Entry
lp12_2338 CDS
T01726
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
lpe
Legionella pneumophila subsp. pneumophila ATCC 43290 (serogroup 12)
Pathway
lpe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lpe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
lp12_2338
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpe03019
]
lp12_2338
03009 Ribosome biogenesis [BR:
lpe03009
]
lp12_2338
Enzymes [BR:
lpe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
lp12_2338
Messenger RNA biogenesis [BR:
lpe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
lp12_2338
Ribosome biogenesis [BR:
lpe03009
]
Prokaryotic type
rRNA helicases
lp12_2338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
CMS1
Helicase_C_2
Cas3-like_C_2
AAA_19
adh_short
Motif
Other DBs
NCBI-ProteinID:
AEW52583
LinkDB
All DBs
Position
complement(2610236..2612005)
Genome browser
AA seq
589 aa
AA seq
DB search
MNQEISNFSTFNFSNALNKALEDMKFITPSPIQAQTIPLILQGRDAIALAQTGTGKTAAF
ALPILQNLSPEISTTQALILAPTRELAIQVAEQFELLSKYQRNVTIAVLCGGQEYGRQLK
QLRSGAQVVVGTPGRILDHIDKGTLLLNNLKTFILDEADEMLRMGFIEDVETILEKLPEK
KQMALFSATMPYRIRQIANTYLNDPASIEIRMETATVKSIEQRFLFASVHQKPDALIRVL
EVEDYQGVIVFVRTKSSTEEVAELLQQHGLRAMAIHGDITQSLRERIIAQFKQGAIDILV
ATDVAARGLDVERVTHVINYDMPHDNETYVHRIGRTGRAGRSGVTILFVTPKESRLISSI
ERHTRQRIEKVQVPNDHMIQMARQQRFMSNITTRLNHEHVYSYKRIVEEYIKEHDVSAVD
VAAALALLLHKDMPWRKELNMPKAASAFKEERARAGEKGLDLRGRFKEDRKSSFADRKGA
RGSKKDFAKDFSNERKKFNDGRKAVNQESVAQDLFRIDVGKIHGVKPGNIVGAIANEAGL
QSRYITGLKIHEDHSTVRLPKGMPKEVMKDLTKAWVCGRQLNLTLIGSA
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaagaaatatcaaacttctctacttttaatttttctaatgctttaaataaggcg
ttagaagatatgaagtttattacgccatcgcctatccaggctcaaaccattcctttgata
ttgcaaggtcgtgatgccattgctcttgcgcaaactggtacaggtaaaacagcggctttt
gcattaccaattttgcaaaatttgtcccctgagatatctaccactcaggctttgatttta
gcccctactcgtgaattggcaatccaggttgcagagcaatttgaattattaagcaagtac
caacgcaatgtgacgatcgccgttctttgcggtgggcaagaatatggtcgtcaattaaaa
caattgcgtagtggtgcgcaagtggttgttggaacgccaggacgtattctggaccatatc
gataaaggcaccttgctcttaaataatctgaagacatttattctggatgaagcagatgaa
atgttgcgtatgggtttcatcgaagatgtagaaaccattttagaaaaactgcctgaaaaa
aagcaaatggcattgttttcagcaaccatgccctatcgaattcgtcaaatagccaatact
tatttgaatgaccctgcctcaattgaaatccgtatggaaactgcgacggtcaagtctatt
gagcaacggtttttatttgcttccgtacatcaaaaaccggatgcgttaatccgggtcttg
gaagtggaggattatcaaggggttatcgtttttgtacgcactaaaagcagtactgaggaa
gtagcagaactattgcaacaacatggattaagagcaatggcaattcatggtgatattact
cagtctttgcgtgagcggattattgctcaatttaaacaaggagcgattgatattctggtg
gcgacggatgtcgctgcaagaggtttggatgtcgagcgagttactcatgtgattaattat
gatatgccacatgataatgaaacttatgttcacagaattggcagaacagggagagctggc
cgttctggtgttacgattttatttgtaactcccaaggaatcgcgtttaatttccagcatt
gaacgccataccaggcaacgaattgagaaagttcaagttcctaatgaccatatgatacag
atggctcgtcaacaaagattcatgtctaacattactactcgactgaatcatgagcatgtg
tattcctacaaaaggattgtggaagaatacattaaagagcatgacgtatcagcagtagat
gttgcggctgctcttgctttattgctgcataaagacatgccttggagaaaagaattaaat
atgcctaaagcagcttcagcattcaaagaagagagagctcgggcaggagaaaaaggattg
gatttacgtggtcgatttaaggaagatagaaaaagttcttttgctgatcggaaaggtgcg
cgaggaagcaagaaagattttgccaaagacttttctaatgaaagaaaaaaatttaatgat
ggcaggaaggccgttaatcaagaatcagtagcccaggatttatttcgtatcgatgtaggc
aaaattcatggagtcaaacctggcaacatagtaggggctattgctaatgaggctggcttg
caaagccgatatattactggtcttaaaattcatgaagatcactctactgttcgtttacca
aaaggtatgccaaaagaagtgatgaaggacttaaccaaggcttgggtttgtggccgccaa
ctcaatttaacattaattggtagtgcctga
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