Lolium perenne (perennial ryegrass): 127292036
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Entry
127292036 CDS
T08650
Name
(RefSeq) zinc finger CCCH domain-containing protein 25
KO
K13107
RNA-binding motif protein, X-linked 2
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127292036
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lper03041
]
127292036
Spliceosome [BR:
lper03041
]
Complex B
Other components
RES complex
127292036
Complex C
127292036
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
zf-CCCH
zf-CCCH_DUS3L
zf-CCCH_4
zf_CCCH_4
zf-CCCH_3
zf-CCCH_9
Torus
zf-CCCH_10
zf-CCCH_PARP12
RRM_7
zf-CCCH_RBM22
zf-CCCH_2
DUF1866
RRM_5
DUF1314
Motif
Other DBs
NCBI-GeneID:
127292036
NCBI-ProteinID:
XP_051177345
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All DBs
Position
4:complement(29288859..29292621)
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AA seq
369 aa
AA seq
DB search
MNPLTQVKQTQLINKKEAALGLSENASWHARFKDSAYVFCGGISFDLTEGDLLAVFAQYG
EVVDVNLVRDKTTGKSRGFAFLAYEDQRSTVLAVDNLNGAKVLGRIIKVDHVDKYKMKEE
EDEEEVAKKREERGVCYAFQKGECNRGDACRFSHDAQRNANTGWGSKEDIEPKWEHDKHR
GPSNKGGVCYAFQKGECSRGDSCRFSHDEQVAVQNRGVCYAFQKGECSRGASCRFSHDEQ
RNANTGRGSRDDSNGRRQHDHDPPKSHKNFPDRTKEETRSGNREGQSSRSDVYRDRDSRT
RHGDRDTEDRDRNRHERSPERSRGERQRDDDRYREERSESKRSRHDRDSGGRHERRGDEE
AERHGKSRR
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccctgacgcaggtgaagcagacccagctgataaacaagaaggaggcggctctt
ggcctcagcgagaacgcctcgtggcacgccaggttcaaggactccgcctacgtcttctgc
ggcggcatctccttcgacctcaccgagggcgacctcctcgccgtcttcgcgcagtacggc
gaggtggtggacgtgaacctcgtgcgcgacaagaccaccggaaaatccaggggcttcgcc
ttcctcgcctatgaggaccagaggagcacggttcttgctgtcgataacttgaacggggct
aaagtccttgggaggatcatcaaggttgaccatgtagataagtacaagatgaaggaggag
gaggacgaggaggaggtggcaaagaagagggaggagcgcggcgtgtgctatgcgttccag
aaaggcgagtgcaaccgcggggacgcgtgcagattttcccatgatgcgcagagaaatgcg
aacactggttggggttctaaggaggatatcgagccaaaatgggagcatgacaaacaccgt
ggtccgtcaaataagggtggtgtctgctatgctttccagaaaggcgagtgcagtcgggga
gattcctgcagattttcgcatgatgagcaggtagctgtccagaaccgtggcgtctgctat
gctttccagaaaggcgagtgcagtcgtggagcttcctgcagattttcacatgatgagcag
agaaatgcaaacactggtcgaggttctagggatgacagcaatggaagacggcagcatgac
catgatcctccaaagagccacaaaaatttccctgacaggactaaagaagagacgagatca
gggaatagagaaggtcaatcctcaagatcagacgtgtacagggaccgagattctaggacg
agacatggcgatagagacacagaagatagggacaggaataggcacgagagatcccctgag
agatcaagaggtgagaggcagagagacgacgacagatatagagaagaaagatcagagagc
aagcggtctcggcatgacagagattctggtggccgtcatgaaaggaggggtgatgaagag
gcagaacggcatgggaaatcgcggagatag
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