Lolium perenne (perennial ryegrass): 127292539
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Entry
127292539 CDS
T08650
Name
(RefSeq) uncharacterized protein isoform X1
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127292539
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lper03019
]
127292539
Messenger RNA biogenesis [BR:
lper03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
127292539
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Roquin_1_2-like_ROQ
Motif
Other DBs
NCBI-GeneID:
127292539
NCBI-ProteinID:
XP_051177919
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Position
4:52865191..52870402
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AA seq
357 aa
AA seq
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MANLPPSLSVGPSFGAPSPPPPPPSSSSAAANAAATAAAGGRDRKMVSAEQLVLDLCDPE
LRENALLDLSKKREIFQDLAPLLWHSFGTVAALLQEIVSIYPSLSPPTLSPVASNRVCNA
LALLQCVASHPDTRIPFLNAHIPLYLYPFLNTTSKTRPFEYLRLTSLGVIGALVKVDDSE
VIGFLLQTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDIGLRYICATAERFFAVATVL
AQMVQALAEQPSARLLKHIIRCYLRLTENARACAALNSCLPTVLKDGTFNSFLQQDDHVT
RRWLQQLLHNMTVAGMAGGSSHAGGMGVGPAGMGGGSSHGGMGGGGPHAGLDHLMGL
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatctgccgccttcgctctccgtcgggccctccttcggcgcgccctccccacca
cctccgccgccctcgtcctcgtccgccgccgccaacgccgccgccaccgccgctgccgga
gggagggaccgcaagatggtgtccgcggagcagctcgtgctcgacctctgcgacccggag
ctgcgcgagaacgctctcctcgacctctccaagaagcgagagatttttcaagatctggct
ccactcctgtggcactcctttggcacagttgctgcactactccaggagattgtttcaatc
tacccttcactttcacccccgactttgtcgccagttgcatcaaaccgtgtctgcaatgca
cttgcacttctccagtgcgttgcttcacaccctgataccaggatacctttcctcaatgct
cacatcccactgtacctgtacccgttcctgaatactaccagcaagacaaggccatttgag
tacttgaggcttaccagcttgggtgtcatcggtgctcttgttaaggttgatgattctgaa
gtaattggatttctgcttcaaactgaaataattcctctttgtctgcgtactatggagatg
ggcagtgaactttccaaaacagtggccacctttattgttcagaagatcctgcttgatgac
attggtctgcgctacatttgcgcaactgccgagcgtttctttgctgtggccactgtctta
gctcagatggtccaggcactggctgaacagccctctgcaaggctgctgaagcacataatc
cgctgctacctgaggctgacagagaatgcgagggcgtgtgctgcgctgaacagctgcctc
ccaaccgtgctgaaagacggtaccttcaactccttcctccagcaggacgatcacgtgact
aggcgctggctccagcagctgctgcacaacatgactgtggccgggatggccggaggaagc
tctcacgccggcggcatgggtgtaggccctgctggcatggggggcgggagctcccacggc
ggcatgggtggaggcggccctcacgcgggcctcgaccacctcatggggctgtga
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