Lolium perenne (perennial ryegrass): 127292690
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Entry
127292690 CDS
T08650
Name
(RefSeq) nuclear pore complex protein NUP58
KO
K14307
nucleoporin p58/p45
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127292690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lper03019
]
127292690
Messenger RNA biogenesis [BR:
lper03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127292690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
NOG1_N
MCAfunc
TFIIA
Motif
Other DBs
NCBI-GeneID:
127292690
NCBI-ProteinID:
XP_051178094
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Position
4:60249154..60255375
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AA seq
473 aa
AA seq
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MSRLGLNIDLDDVARRLSFSPDPDRPPQMPPRQVGRFRVQPALSPIAEEQEAAATATHTP
ARPPPWVSSPSPAPPSAPHTGTYESPAMSLPPVSPSPSPFRTQVPAPPTPQQVAAALGKL
EQARQAGLQQAWVAAQQQQALAFALGGWEQRRQAGLQQSWAHPQPQQAAAAALEQGRTSG
PQQAWAQAQQHPEPQQQLRLYTVEGEPAGYKTKWEELHPFSQHLLLQIEDKIREERHACE
QLEQCSRLCDPSVSSSSFELDARQITQEIGSISTIMNREKASIQRLMDAVKESMSTAEFA
IGSYVNLRPWFVSRGAGIANTSSANHGGSSAARTHGSVRRPSTFMQRIVDRFEKQLEECC
KLIGELEQLVQMKNTKTYPPSLESLPKVMSNMHDYFIYVASKVENLHQYADAIRIQYLND
MRNSGNRNDPFVEADRKEAAKQEAASRTVHPTLAAHPSPHRMVMPRSRRQMCN
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaggctgggcctcaacatcgacctagacgacgtcgccaggcgcctcagcttctcc
ccggaccccgaccgcccgccgcagatgccgccgcgccaggttgggaggttccgggtgcag
ccggcgctctcgccgatcgccgaggagcaagaggcggcggcgacggcgacgcacaccccc
gcgcgtcctccgccatgggtctcctcaccgtcgccggcgccgccctccgcgcctcacacg
gggacctacgagagtcctgcgatgtccctaccccccgtgtcgccgtcgccatcgccattc
cgcacgcaggtcccggctcctcccacgccgcagcaggttgcggcggcgctggggaaattg
gagcaggcacgccaagccgggctgcagcaggcgtgggtggcggcgcagcagcagcaggcg
ctcgcgttcgcgctcgggggatgggagcagcgacgtcaggccgggctgcagcagtcatgg
gcgcacccgcagccgcagcaggcggccgcggccgcattggagcagggacgtacgtcgggg
ccgcagcaggcgtgggcgcaagcgcagcagcatccggagccccagcagcagctgaggctg
tacacggtggaaggggaacccgcggggtacaagaccaagtgggaggagctccatcccttc
tcccagcacctcctgctacagatcgaggacaagataagggaggagaggcatgcgtgtgag
cagttggagcaatgcagccgcctctgcgacccgtcagtctccagtagcagttttgaactg
gatgctcgtcagattacacaggagattgggtcaatctccaccatcatgaacagggagaag
gcttccattcagagattaatggatgctgtcaaagaaagtatgtccactgcagaatttgct
ataggttcatatgtgaacttgagaccgtggtttgtcagcagaggtgctggaattgcaaat
accagttctgcaaaccatggtggatcttcagccgctcgtactcatggttctgtaaggcgg
ccctctacctttatgcagcgcattgttgacagatttgagaagcaacttgaagagtgttgc
aaattgattggagagctagagcagcttgttcagatgaagaatactaaaacatatccacct
tctttggaatctctgccaaaagttatgtcgaacatgcatgactattttatctatgttgct
tctaaggtggaaaatcttcatcaatatgctgatgcaataaggattcaatatcttaatgat
atgcggaacagtggtaatcggaatgatccatttgtggaagcggatagaaaagaggcagcg
aaacaagaagccgcttcaagaacagtccatccaacattggctgcccacccgtctccacac
agaatggtgatgccccgaagcaggcgtcagatgtgcaactga
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