KEGG   Lolium perenne (perennial ryegrass): 127292798
Entry
127292798         CDS       T08650                                 
Name
(RefSeq) cleavage stimulation factor subunit 50
  KO
K14406  cleavage stimulation factor subunit 1
Organism
lper  Lolium perenne (perennial ryegrass)
Pathway
lper03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:lper00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    127292798
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lper03019]
    127292798
Messenger RNA biogenesis [BR:lper03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     127292798
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EML_2 Beta-prop_WDR3_2nd WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd WDR55 EIF3I WD40_Gbeta Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_EML NBCH_WD40 Beta-prop_Aladin WDR90_beta-prop_4th WD40_RFWD3 Beta-prop_WDR90_POC16_2nd Cytochrom_D1 Beta-prop_NWD2_C Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_NOL10_N Beta-prop_WDR41 Beta-prop_Nup120_160 Ge1_WD40 Beta-prop_VPS8 DUF6117
Other DBs
NCBI-GeneID: 127292798
NCBI-ProteinID: XP_051178213
LinkDB
Position
4:complement(64993023..64997410)
AA seq 426 aa
MDAAVQEAKLLRQVNALIVAHLRDQNLTQAALAVAAATMTPLSAAASLPNHLLRLVAKGL
AVEQGEAARGGGAPAAFDSAGGGGMGRPLATNAVDFSMQNVKGPSKSFSKHEAKHISDHK
NVARCAKFSPDGRYFATGSGDTSIKFFEVAKIKQSMLGDSKDGGRPVVRTFYDHMQPIND
LDFHPTSPILISAAKDNTIKFFDFSKTAARKAFRVIQDTHNVRSVCFHPCGDYILAGTDH
PVAHLYDVNTFTCYLAANPQDCTAAINQVRYSDTGSLYVTASKDGSLRIWDGVSAECVRT
ISGAHGSAEATSAIFTKDERYILSCGKDSSINLWEVGTGRLVKQYAGAVNGQFRCQAVFN
ESGEFVISTDEQTSEVVVWDALTTEKVARLPSGHTGAPRWLEHSPVEPAFVTCGNDRSVR
FWKQTA
NT seq 1281 nt   +upstreamnt  +downstreamnt
atggacgcggcggtgcaggaggcgaagctgctgcggcaggtgaacgcgctcatcgtggcg
cacctccgcgaccagaacctcacgcaggccgccctcgccgtggccgccgccaccatgacc
ccgctctccgccgccgcctccctccccaaccacctcctccgcctcgtcgccaagggcctc
gcggtcgagcagggggaagcggcgaggggaggtggagctcccgccgcgtttgactccgct
ggtggcggtggtatggggcgcccgctcgccaccaatgccgtggatttcagtatgcagaat
gttaagggcccttccaagagcttttccaagcacgaggccaagcacatctctgatcataag
aatgttgcccgatgtgcgaaatttagtcccgatggtagatattttgcaactggaagcgga
gatacatcgatcaagttctttgaggttgcaaaaatcaagcagtcgatgctaggggattcc
aaagatggtggccggcctgtggttcgtacattttatgatcacatgcagcccatcaatgac
ctggattttcatcctactagcccaatactgatatctgcagcaaaagataacacaataaag
ttttttgacttctcaaaaactgctgcaaggaaggcgttcagagttattcaggatactcat
aatgttagatctgtatgttttcacccttgtggggattacattttagcagggactgatcac
ccagttgctcatctctatgatgtgaacactttcacatgctacttagcggcaaatccacag
gattgtactgctgccattaaccaggtgcgctactcggatactgggagcttgtatgtgact
gcttcaaaggatggttctctgcgcatctgggatggagtatctgctgaatgtgtccgtaca
ataagtggagcacatggatctgcagaagctactagtgcaattttcaccaaagacgagagg
tacatcctatcatgcgggaaggattcttctataaatttatgggaagttggaaccggaaga
cttgtgaagcaatatgctggtgctgttaacgggcaattccggtgccaggctgtctttaat
gaaagcggggagtttgtaatatcaactgacgaacaaaccagcgaggttgtcgtctgggat
gcacttactactgaaaaggtggcaagattgccctctggccacactggcgcccctaggtgg
ctggagcactctcctgtagagccagcgtttgttacatgcggaaacgaccgatccgtcaga
ttctggaaacaaacggcgtag

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