KEGG   Lolium perenne (perennial ryegrass): 127292873
Entry
127292873         CDS       T08650                                 
Name
(RefSeq) autophagy-related protein 16
  KO
K17890  autophagy-related protein 16-1
Organism
lper  Lolium perenne (perennial ryegrass)
Pathway
lper04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:lper00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    127292873
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lper04131]
    127292873
   03029 Mitochondrial biogenesis [BR:lper03029]
    127292873
Membrane trafficking [BR:lper04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    127292873
 Others
  Specific organelles associated proteins
   Auto phagosome
    127292873
Mitochondrial biogenesis [BR:lper03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    127292873
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz EIF3I WD40_WDHD1_1st WDR55 ATG16 Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_SCAP Beta-prop_HPS5 Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_DCAF12 Beta-prop_IFT122_1st WDR90_beta-prop_4th Vps52_CC AdoHcyase DAHL Beta-prop_SPT8 Filament CCDC93_CC Beta-prop_RIG_1st DUF6923 DUF5738 Phlebovirus_NSM CorA TBCA TPR_MLP1_2
Other DBs
NCBI-GeneID: 127292873
NCBI-ProteinID: XP_051178347
LinkDB
Position
4:complement(68629032..68632289)
AA seq 521 aa
MADAKAAMAAIGRVTRKLRRRDAVEVDAHRPAIEALNRPFAAQALEWKEKAEKYELELQH
LYKAHSRSSEQLVTLIEELKALKALLKEKEALIPTLQSELGQTSEENVQLKQSLEEKTNA
LELLIQEHQAAKAELEQALAKLKGVENENTQLVERLMQAKMVEAEKLNEANAMYEEMVLK
LKAAGLGAGGMQHHAEQEADGIIRRSEAGYIDIIETPIPSAPRITIRAHEGGCGSIIFQN
NTDMLISGGQDQTVKIWSAHTGALSSTLQGCLGSVNDLAVTNDNKFVIAACSSNKLFVWE
ANGGRPRHTLTGHTKSVSSVDASWVKSLVIASSSSDRTIKIWDLQTGFCKSTIMSASNPN
SLVFIHGDTICSGHRNGSLQFHDIRTGKSSATTVGAHTDVTSVCVSRSKTYVLSSGRENV
HKLFDVRMPTVLVEDSGTLRAPGNRVIGSWGRPCISPDEKCIAAGSSDGSVYIWPKPKDE
KDAPQPLAILEGHHSLPVVSSAWSGYGPLATADKNHIHIWA
NT seq 1566 nt   +upstreamnt  +downstreamnt
atggcggatgccaaggccgccatggcggcgatcgggagggtcacgcggaagctgcggcgg
cgggatgccgtggaggtggatgcccaccgccccgccatcgaggcgctcaatcgccccttc
gccgcccaggccttggagtggaaagaaaaggcggagaagtacgagttggagctgcaacat
ctctacaaggcgcattcccgttcgtccgagcagctggttaccttgatagaagagctgaaa
gcgttgaaagcgctgctcaaggagaaggaggcgctcattccgactttgcagagcgaactt
gggcagactagcgaagaaaacgtacagctaaagcaatcgcttgaagaaaagacgaatgct
ttagagcttctaattcaggagcaccaggcggctaaagctgagcttgagcaggcgctagcg
aaactgaaaggtgtggagaatgagaacacgcagctcgtcgagcggctgatgcaagcgaag
atggtggaggcagagaagcttaacgaggccaatgcgatgtatgaggagatggtcttaaag
ctaaaggcagctgggcttggcgctggtggaatgcaacaccatgcagaacaagaagctgat
ggcatcattcgtcgatccgaagcagggtacattgacatcattgaaacaccaatcccatct
gcacccagaatcaccatccgtgctcatgagggtgggtgtggatctataatattccagaat
aacacagacatgctaatcagtggtggccaggatcaaactgtcaagatatggtctgcacat
actggtgctttgagctccaccctacagggttgcttggggtctgtcaatgatcttgctgtg
accaatgataacaagtttgtaattgccgcgtgtagctctaacaagctgttcgtatgggaa
gctaatggggggcgtcctcgtcacactctgactggtcacacaaaaagtgtttcttctgta
gatgcaagctgggtgaaaagcttggttattgcgagttcatccagtgaccgtactatcaag
atttgggatctccagactggcttctgtaaaagcaccataatgtcagcaagcaaccccaac
tcgctagttttcatccatggcgataccatttgctcaggtcataggaatggaagccttcag
ttccatgatatccgcactggaaaatcctcagccacaacagtgggtgctcatactgatgtc
acgtcggtctgtgtatctcggagcaaaacttatgttctttcaagtggaagagagaacgtg
cataagctttttgatgttaggatgccaacagtgttagtggaggattctggaacactcagg
gccccaggtaacagagtgattggcagctggggcagaccttgtataagcccagatgagaaa
tgcattgcggctggctcttctgatgggtctgtttacatatggccgaagccgaaggatgag
aaggatgcgccgcagccgctggccatcctagagggccatcattcgttaccggttgtttca
agcgcatggtccgggtatggacctcttgccaccgctgacaagaatcatattcatatctgg
gcttga

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