KEGG   Lolium perenne (perennial ryegrass): 127293156
Entry
127293156         CDS       T08650                                 
Name
(RefSeq) vacuolar sorting protein 39
  KO
K20183  Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
lper  Lolium perenne (perennial ryegrass)
Pathway
lper04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:lper00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    127293156
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lper04131]
    127293156
Membrane trafficking [BR:lper04131]
 Endosome - Lysosome transport
  Tethering complex
   Hops complex
    127293156
SSDB
Motif
Pfam: Vps39_1 CNH zf-Vps39_C Clathrin TPR_Vps41 AlaDh_PNT_N
Other DBs
NCBI-GeneID: 127293156
NCBI-ProteinID: XP_051178683
LinkDB
Position
4:83681529..83691486
AA seq 984 aa
MVHSAYDAVELVSGVPGRIEAVASHAGKLLVAASDCSLRIYSPPVPADGEIRRDGPYALE
RQEQRLWRRAPSAMEASATRDLLLSLSDWVALHRLPGLETVAVVSKTKGANVFAWDDRRG
LLAAGRQKRLTIFRLDGGREFVEVKEFGVPDMVKSMAWCGDNICIGIRRDYMIINSVTGA
LTEVFSAGRIAPPLVVPLPTGELLLGKDNIGVFVDQNGKLIQDGRIIWSDTPASVVIHKP
YAVARLPRHVEIRSLRAPSALVQTVVLRDVQKLVQTDNCILAALSNSVYGLLPVPIGAQI
VQLTASGEFEDALALCKLLPPEDSNLRAAKESSIHMRYGHFLFDNGSYEEAMEQFSDSHV
DITYVFSLYPSLVLPQTHIIGEHDKLHDLPELARESSDVTDEMESYSLQLHDSDDKSPLE
NKKMSHNSLIALVKYLQKKRNGIIDRATSEVTEEVVSGAVHHSLILSEPYKAKKPNKKRP
QTLRSSVARELATVLDTSLLQALILTRQSSGAVELLKGLNYCDLKICEEFLKERSDYMVL
IELYRSNDMHREALQLLNQLVEKSKSEMANTDSIKKINPQMIIEYLRPLCRSDPMLVLES
SLYVLERNPSDTIELFLSENVPADLVNSYLKQHAPNLQSTYLELMLSMSETGINPNLQNE
LVQLYLSEVLDWYKILKDEGNWTDKTYSPTRNKLISTLESNSGYNTDTLLKRLPQDALFE
ERAIMYGKMNQHLRALSLYVHKLHMPERAVAYCDRVYEEGAQQPSKSNIYFNLLQIYLNP
RKAEKEIEQKIIPVASQYPGIQRVSSTTKVRGGRMGRKVVEIEGAEDIRFSTSGTDNGRS
DGDTDDVSDGGPIMLNEALELLSQRWDRINGAQALRLLPRDTKLQDLVSFLEPLLRNSSE
HRRNYMVIKNLILRANLEVKEDLYKRRQAVVKIDGDSMCSLCHKRIANSAFAIYPNGQTL
VHFVCFRESQQIKAVRGSNSGKRR
NT seq 2955 nt   +upstreamnt  +downstreamnt
atggtgcacagcgcgtacgacgccgtggagctggtctccggcgtgccgggccgcatcgag
gccgtcgcctcgcacgccgggaagctcctcgtcgcggcctccgactgctccctccgcatc
tactccccgccggtccccgccgacggcgagatccggagggacgggccctacgcgctcgag
cgccaggagcagcgcctctggcgccgcgcgccctccgccatggaggccagcgccacccgc
gacctcctgctctcgctctccgactgggtcgccctccaccgcctcccggggctcgagacc
gtcgccgtcgtctccaagaccaagggcgccaacgtcttcgcctgggatgaccgccggggc
ctgcttgccgccggccgccagaagcgcctcaccatcttccgcctcgacggtgggcgagaa
tttgtcgaggtgaaggaatttggtgttcctgatatggtgaaatcaatggcctggtgtggt
gacaacatatgtattgggattaggagggactatatgatcataaatagcgtgaccggagca
ttaactgaagtgttttctgctgggaggattgctcctccattagttgtgcctcttcctacc
ggtgagctcctccttggaaaggataacattggagtatttgttgatcaaaacgggaaactt
attcaagatggccggataatttggtcagatactcctgcttctgttgttatacataagccg
tatgccgtggcacgtctgccacgacatgttgagatacggtctcttagagctcccagtgca
ttggttcagacggtggtcctccgtgatgttcagaagcttgttcaaactgacaactgtata
cttgctgcgctttccaactcggtctatggtttgctgcctgttcctattggtgcccagata
gtgcaattgactgcctctggagaatttgaagacgcgctggcattgtgtaagttacttcct
ccagaggattcaaacctacgagctgcaaaggaaagctcaatacacatgagatatgggcac
ttcttatttgataatgggagctatgaggaagcaatggaacaattttcggattcacatgtg
gatattacatatgtgttttctctatacccatctcttgttctgcctcaaacacacattata
ggtgaacatgacaagctccacgacctgccagaattagcaagagaatcatctgatgtgaca
gatgaaatggaatcatactctttgcaacttcatgactctgatgataaatctccactggag
aacaagaaaatgagtcataattctctaatagcccttgtgaagtacttacagaagaaaaga
aatgggattattgatagagcgacgtctgaagtaacagaggaggtggtctctggagctgtg
caccatagcttaatcttatctgagccatataaggcaaagaagccaaataagaaacgaccc
cagacgcttagaagttctgttgctagagaattggcgactgtactggacacatctcttctt
caagctcttattcttacaagacagtcatcaggagctgttgaattattgaaaggactcaac
tattgtgatttgaagatatgcgaggagtttctgaaggaaaggagcgattatatggtgtta
attgagctctataggagcaatgacatgcaccgtgaagctctccaattactcaatcagttg
gttgaaaaatcgaagtctgagatggcaaatactgattctattaaaaaaattaacccgcaa
atgatcattgaatatctcaggcccctttgtagatctgacccaatgctggttttggagtct
tctttgtatgttcttgaacgcaacccgtcagacactattgagctctttttgtctgaaaac
gttccagcagatttggtaaattcatatctgaaacagcatgctccaaatttgcagtcaact
tacttagagctaatgctctcaatgagtgaaacggggatcaaccctaatctacaaaatgag
ttggtgcaactctacctttctgaagttcttgactggtacaagattctgaaggatgaggga
aattggactgataaaacgtattccccaacgcggaacaagttgatatctacattagagagt
aattcaggttacaatacagacacacttcttaaacgtcttccccaggatgctcttttcgaa
gagcgtgctataatgtacgggaaaatgaatcaacatctccgtgcattatctctgtatgtt
cataagctccacatgccagagcgcgcagttgcatactgtgatcgtgtttacgaggaagga
gcgcagcagccttccaagtccaatatttattttaatcttctccaaatttatctaaaccca
agaaaagctgaaaaagaaattgagcagaaaattattccagtggcatcacagtaccctgga
attcagagggttagctctactactaaggtcagaggagggcgtatgggtagaaaggttgtt
gagatcgaaggggctgaagacatacgctttagtactagtggaacagataatggccgaagt
gatggcgacacggatgatgttagtgatggaggccctataatgttgaatgaagcacttgaa
ttgttaagccaaaggtgggacagaataaatggtgctcaggctcttcggttgttacccaga
gacacaaaactgcaggatctggtgtcatttcttgaaccactacttcggaactctagtgaa
catcggcgcaattatatggttatcaaaaacttgattctccgagcaaacttagaggtaaag
gaggatctgtacaagcgacgtcaagctgttgtgaagattgatggagatagcatgtgttct
ctttgtcataaacgcattgcaaacagtgcttttgcaatttatccaaatggacagacattg
gtgcattttgtatgctttagagaatcacaacagattaaggctgttagaggatcaaactct
gggaaacgtagatga

DBGET integrated database retrieval system