Lolium perenne (perennial ryegrass): 127293188
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Entry
127293188 CDS
T08650
Name
(RefSeq) coatomer subunit alpha-3
KO
K05236
coatomer subunit alpha
Organism
lper
Lolium perenne (perennial ryegrass)
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lper04131
]
127293188
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lper04147
]
127293188
Membrane trafficking [BR:
lper04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
127293188
Exosome [BR:
lper04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
127293188
Exosomal proteins of bladder cancer cells
127293188
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
EIF3I
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
TPR_COPA_B
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_WDR41
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_Aladin
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Fis1_TPR_C
Beta-prop_ACSF4
ENTH
Beta-prop_At4g14310
ThaI
Motif
Other DBs
NCBI-GeneID:
127293188
NCBI-ProteinID:
XP_051178721
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All DBs
Position
4:85920853..85925915
Genome browser
AA seq
1214 aa
AA seq
DB search
MLTKFETKSNRVKGLSFHPRRPWILASLHSGVIQMWDYRMGTLLDRFDEHDGPVRGVHFH
ATQPLFVSGGDDYKIKVWNYKTHRCLFTLTGHLDYIRTVQFHHEYPWIVSASDDQTIRIW
NWQSRTCVAVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDIMR
LTQMNTDLFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNDTKAWE
VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRIWDATKRTGIQTFRREHDRFWILAAHP
EMNLLAAGHDSGMIVFKLERERPAFSVSADTVFYVKDRFLRFFEYSTQKEVQVAPIRRPG
SVSLNQSPRTLSYSPTENAVLVCSDVDGGSYDLYIVPKDSTGSLQDAKKGAGGSAVFVAR
NRFAVLEKSSNQVLVKNLKNEIVKKSPLPIATDAIYYAGTGNLLCKAEDRVTIFDLQQRL
VLGELQAAGVKYVVWSTDMESVALLSKHAVVIASKKLVHRSTLHETIRVKSGAWDENGVF
VYSTLNHIKYCLPNGDSGIIKTLDVPIYITRVIGNNIFCLDRDGKNKLITVDASEYIFKL
ALFRKRYDHVMSMIKSSQLCGQAVISYLQQKGFPEVALHFVKDEKTRFNLALESGNIQIA
VASAKEIDDKDHWYRLGIEALRQGNVGIVEYAYQRTKNFERLAFLYLITGFMDKVGFMCK
IAGQNNNLMGQFHNALYLGDARKRAEILENAGQLPLAYATAATHGLSEIADRLAAELGEN
VPSLPAGKSRSLLIPPAPLISSVDWPLLRVMRGTFEVGLDATGRAEVEEDDEAVIPDWDD
EDLNIVDASDAVANDDGFNAEEGEANEEDGEDGGWDLEDLELPPEADTPKAAGNTRSTVF
VAPTPGMPVSQIWTQKSSLAGEHAAAGNFDTAMRLLSRQLGIKNFAPLKSLFLDLHMGSH
SYLRALATAPVVPIAVEKGWSESSSPNVRGPPALVFSFSQMEDRLKAAYKATTEGKFPEA
LRQFLSILHTIPLIVVDSRREVDEVKELIEIVREYVLGLRMELKRKELKDNVNRQQELAA
YFTNCKLQRVHMRLVLSNAMALCYKQKNFATAEHFARLLLENSPNEVQAKKARQVQQQCS
GKRDSAELNYDYRNPFVVCGSTYVPIYRGQKDISCPYCASRFVPSVEGQLCTICELAVVG
ADASGLLCSPTQQR
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccaagttcgagaccaagagcaaccgggtcaagggcctcagcttccacccgcgg
cggccatggatcctcgccagcctccacagcggggtcatccagatgtgggactaccgcatg
ggcaccctcctcgaccgcttcgacgagcacgacgggcccgtccgcggcgtccacttccac
gccacccagccgctcttcgtctccggaggcgacgattacaagatcaaggtgtggaattac
aagacgcaccgctgcttgttcacgcttactggccacctcgactacatccgtaccgtgcag
ttccaccacgagtacccgtggatcgtaagtgccagcgatgaccagacgatccggatctgg
aactggcaatcgcgcacttgcgtggctgtgctgaccgggcataaccactatgtcatgtgc
gcgtctttccaccccaaggaggacctggttgtgtcggcgtcgctagatcagactgttcgt
gtctgggatattggtgctctgaggaagaagacggtgtcacctgctgatgacatcatgcgt
ctcactcagatgaacactgatctgtttgggggtgttgatgcggttgtcaagtatgtcttg
gaaggccatgaccgtggtgtcaactgggcctcatttcatcccactctgccgctcattgtt
tctggggcagatgatcggcaagtgaagctgtggagaatgaatgataccaaggcttgggaa
gtcgatactctgagggggcacatgaataatgtgtcctgtgtgatgttccatgcgaagcaa
gacatcattgtgtccaactcagaagacaaaagcattcgcatctgggatgccacaaagcgc
actggtattcagacatttaggcgggaacatgaccgtttctggattcttgctgctcaccct
gaaatgaatcttcttgctgctgggcatgacagtggcatgattgtgttcaaattagagagg
gaacgtccagctttcagcgtcagtgctgatactgtattctatgtgaaggacagattcctc
cgtttctttgagtactccacccagaaggaagttcaggtggctccaataagaagaccaggc
tcagtcagcttgaaccagtcacccaggacactatcttacagtccaacagaaaatgctgtg
ttggtatgctcagatgtggatgggggctcatatgatctctacatcgttcctaaggattct
actggcagtttgcaagatgcaaagaagggagctggtggttcagctgtttttgtggcacgg
aataggtttgctgtccttgagaagagtagcaatcaagttttggtgaagaatcttaagaat
gaaattgtgaagaaaagtcctcttcctatagcgactgatgcaatttattatgctgggact
ggtaatttgttgtgcaaagctgaagaccgtgtgaccatctttgatctacagcaaaggcta
gttcttggtgaactccaggcagctggtgtcaagtatgttgtttggtccactgacatggag
tctgttgcattgctgagcaagcatgcagtagttatagctagcaagaagcttgtccatcgt
tccacactgcatgaaaccattcgtgtgaaaagtggtgcatgggatgagaatggtgtgttc
gtttactctacactgaaccatatcaaatactgtcttcccaatggagacagcgggatcata
aaaacccttgatgttcctatttacataacgagggttattgggaacaacattttctgtctg
gatcgtgatggaaagaacaaactgataacagtggatgcttcagaatacattttcaagctc
gcccttttccggaaacgttatgatcatgttatgagtatgattaagagctcacagctgtgt
ggacaggcagtaatttcatatttacaacagaaagggtttccagaagttgctctccacttt
gtgaaagatgagaagacaagatttaatctagctcttgagagtggtaacatccaaattgca
gttgcttctgcaaaagagattgatgacaaagatcactggtacaggctgggaattgaggcc
ctgagacaggggaatgttggtattgtggaatatgcataccagcggacaaagaattttgag
aggcttgcttttctgtatctcattactggtttcatggataaggtgggcttcatgtgcaaa
attgctggacagaataacaatttgatgggtcagttccacaatgcattgtatcttggggat
gctaggaagcgagctgagatcctggagaatgctgggcagctacctcttgcctatgctact
gctgccactcatgggctcagtgaaattgctgataggcttgctgctgaattgggtgagaat
gttccttctctacctgcaggaaaatctcgctcacttttgattccccctgcacctctcata
tccagtgttgattggccattgctccgtgtgatgcgtggtacttttgaggttggattggat
gctactgggagagcagaggttgaggaagatgatgaagctgttattcctgactgggatgat
gaggacttgaatattgtggatgcaagtgatgcagtggcaaatgatgatggttttaatgct
gaggagggcgaagcaaatgaggaggatggcgaggatggtggctgggatcttgaagatctg
gaattaccacctgaagcagatacaccaaaagctgcaggaaatactcgctccaccgtgttt
gttgctcctacaccaggcatgcctgtcagccaaatttggactcagaaatcttctcttgct
ggcgagcatgcagcagcaggaaactttgacactgccatgaggttgcttagccgccagttg
ggtatcaagaactttgctcccctgaagtccttgtttcttgatctccatatgggcagtcat
tcatatcttcgtgcacttgcaactgctcccgttgtaccaattgctgttgagaaaggttgg
agcgagtcttcaagtcctaatgtgagggggcctcctgccctagttttctccttctcacaa
atggaagacagactcaaggcagcctacaaagccacaactgagggaaagttcccagaagcg
ctgaggcaattcctcagcatcttgcataccatccctcttattgtggtggactcacgaaga
gaagttgatgaagtgaaggagctgatcgagatagtgagggagtatgttcttggtttaaga
atggaactcaagagaaaggaattgaaagacaatgtcaaccggcaacaggaattggcagcc
tacttcactaactgcaagcttcagagggttcacatgagacttgtgctctcaaacgccatg
gctctgtgctacaagcagaagaacttcgcgaccgcagagcatttcgcgaggctgcttctt
gagaacagccccaacgaggtccaagcgaagaaggctcggcaggtgcagcagcagtgcagc
ggcaagcgagacagcgctgagctgaactacgactacagaaatccattcgtggtatgcggt
tctacatacgtccccatctaccgtggccagaaggatatttcctgcccatactgtgcatcc
cggtttgttccttcagttgaagggcagctttgtaccatatgcgagctggccgtggtcggc
gcggacgcctcaggcctcctgtgctcccctacacagcagagatga
DBGET
integrated database retrieval system
