Lolium perenne (perennial ryegrass): 127293277
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Entry
127293277 CDS
T08650
Name
(RefSeq) uncharacterized protein
KO
K13114
pinin
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03013
Nucleocytoplasmic transport
lper03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127293277
03015 mRNA surveillance pathway
127293277
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lper03019
]
127293277
03041 Spliceosome [BR:
lper03041
]
127293277
Messenger RNA biogenesis [BR:
lper03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
127293277
Spliceosome [BR:
lper03041
]
Complex C
Other components
EJC/TREX
127293277
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_memA
DUF5520
Motif
Other DBs
NCBI-GeneID:
127293277
NCBI-ProteinID:
XP_051178815
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Position
4:90770525..90774830
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AA seq
402 aa
AA seq
DB search
MAAASEKTAEDIRRELQELQRQHREISERLRDPRGLRRGAPPTGPGGPRPIRGFQRPAPE
PVDQPEPKRRLLSAVVKVDSAEGKEEDANSAAAAEGRENGGSVAAEGAERRGAGNGGFRR
DGTQWVSRRELDKALPEPLPRQFPKDDDQSLVRRNRRMLGKLLVGTLEKFQQEDKKLSNS
EAFMRRSEAQQKADQKAREDSERLRQQEREQAAEKRRRDMTLRARVAAKAEEKRLELLYL
QWTEHHKKLSNFLRTKAEPAIYYMPVKPLSDDPAIVEQTKEKTFEEWKSVRRAELNQFQK
QVEEHYLSNVEKQLERIQNARNARKGNVPANMQEMDKELDTHRAEHGPKARRIPDGDNDE
DEDVDDMAVEDYLMDEVLGVSEDPTKPSEETTDVAPVPDEAQ
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgcgtcggagaagacggccgaggacatccgccgcgagctccaagagctccag
cgccagcaccgcgagatcagcgagcgcctgcgcgacccccgcggcctgcgacgcggggct
ccccccaccggccccggcggcccccgcccgatccgcggcttccagagacccgctccggaa
ccagtggaccagcccgagccgaagcgccgccttctgtctgccgtggttaaagtggacagc
gctgaaggtaaggaggaggatgcgaatagtgcagcggcggccgaggggcgtgagaatggt
ggttcggttgctgctgaaggtgccgagaggaggggagccggcaatggtgggttcaggagg
gatgggacccagtgggtgtcaaggagggagctcgataaggcgctgccggagcctctcccg
aggcagtttcccaaggatgatgaccagagcttggtcaggaggaacaggagaatgctaggg
aagctccttgttggcacgctagagaaatttcagcaagaggataagaaattgtccaactca
gaggcttttatgcgtcgatcagaggctcagcagaaggctgatcaaaaggctcgcgaggac
agcgaaagattgcgacagcaagagcgggagcaagcagcagaaaagcgtaggcgcgatatg
acacttcgtgctcgagtagctgctaaggcagaagagaagaggttggagctgttgtaccta
cagtggactgagcatcacaaaaagctgtccaatttcttaaggacaaaagctgaaccagct
atttattacatgccagttaaaccactaagtgatgatccagctattgttgagcagaccaag
gaaaagacattcgaagaatggaagtctgtacgtagggctgagctgaaccagtttcagaag
caagttgaggagcactatttgtctaacgtcgagaagcagctggaaagaattcagaatgcc
cggaatgctcggaaggggaacgtccctgctaacatgcaggaaatggataaggagctggac
acacacagggcagagcatggtccaaaggctcggcggatccctgatggtgacaacgacgag
gatgaagacgtagacgacatggctgtggaagattacctgatggatgaagtccttggcgtc
agtgaggacccaaccaagccgtctgaagagactactgatgttgctcctgtacccgacgag
gcacagtag
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