Lolium perenne (perennial ryegrass): 127293311
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Entry
127293311 CDS
T08650
Name
(RefSeq) uncharacterized protein isoform X1
KO
K11790
denticleless
Organism
lper
Lolium perenne (perennial ryegrass)
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lper04121
]
127293311
Ubiquitin system [BR:
lper04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
127293311
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_DCAF12
Beta-prop_DCAF4
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR11_1st
Beta-prop_Vps41
Beta-prop_IFT140_1st
MIOS_WD40
PEP5_VPS11_N
Ge1_WD40
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
127293311
NCBI-ProteinID:
XP_051178852
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Position
4:92237981..92241820
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AA seq
526 aa
AA seq
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MAMRPPSSGSFFGGLRARELSGGGGSSARASAARLHYLSDLASDPGGRGCGVISVDHDGD
AAIPFAVSFCKAALVSRLLAVADEDGYVSLYDTRRRLPSRSSSLDKSAETRLSDWVAHNN
AIFDVCWIKEGSQLLTASGDQTVKIWSLENKKCLGVLSGHTGSVKSLSCHSSNPELIVSG
SRDGSFALWDLRCDPKAPNSHGEACLRSSAVVKEAHSPVRKSRTRSRAKGASTSITSVLY
LKDDISIATSGAADNVVKLWDTRNLKAPVSNKTSQSTAQPSKEGVTHGISCLSQDSYGAY
IAASCMDNRIYLYSALHMDKGPIKCYTGSKIESFFVKSAISPDGTHILGGSSDGNIYLWQ
VDQPELGPIVLKGHEGEATSVDWCALEVGKIVSSSDDTTVRVWNTKKIDCTNISSPTVIR
KRVTAPKIECPRSASHEQATTSRDVAACNSAGGEFPTSSHSPLRPRVLEFGTPESAKKRA
YSLFQEEALETRNSPGGQTDSPSSVLNPPPSLKRKTIRDYFASSTS
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgcggccgccatcctccggctccttcttcggcggcctgcgggcccgggagctc
agcggcggcggaggctcctccgcccgcgcctccgcggcgcggctgcactacctctccgac
ctcgcctccgaccccggcggccgcggctgcggcgtcatctccgtcgaccacgacggcgac
gccgccatccctttcgccgtctccttctgcaaggcggcgctagtctcccgcctcctggcc
gtcgccgacgaggacgggtacgttagcctctacgacacccgccggcgcctcccctccaga
tcctcgtccctagacaagtcagctgaaacgaggctgtccgattgggtcgcccacaacaat
gcaatcttcgatgtgtgctggatcaaggaaggatcgcaattgctgactgcatcgggcgac
caaactgtaaagatatggagcttagaaaataagaaatgccttggcgtgctgtcagggcac
accggcagtgtgaagtcactgtcatgtcattcttccaatcccgagcttattgtttctggt
tcaagggatggctcgtttgctctctgggatctaagatgtgaccccaaagctcctaatagt
catggtgaagcatgcctcaggtcttccgctgttgtcaaagaagcgcatagtcctgtgcgg
aagagtcggacgaggtctcgagcaaagggagcttcaaccagcatcacatcagttctttat
ctgaaagatgatatctccattgccacttctggtgctgcagacaacgttgtaaaactttgg
gatacacggaaccttaaagcgcccgtttccaacaaaacatctcaatcaacagcacaacct
tcgaaggagggggtgacacatggaatctcttgcttgtctcaagactcatatggtgcgtac
atagctgcgtcatgcatggataacaggatctatctgtatagtgctctccatatggacaag
ggtccaataaagtgttacaccggcagcaaaattgagtctttctttgtcaagtctgccatt
agtccagatgggactcatattctaggtggttcgagtgatggtaacatatacttgtggcag
gtggatcaacctgaacttggccctatagttctaaaaggccatgagggtgaagctacttca
gttgactggtgtgctttagaggttggaaagatagtatcatcatctgatgacaccacggtt
cgggtatggaataccaagaaaatagactgcaccaacataagctccccgacagttatccgt
aagagggtaaccgccccaaaaattgagtgcccaagatcggctagccatgagcaagctact
acttcaagagatgtagcagcctgcaacagtgcaggcggtgaatttccaaccagttcacat
tcccccctccgccctagggtgttggagtttggcacacctgagtctgcaaaaaagagagcc
tattctttgttccaggaggaggccttggagactaggaatagcccaggtggtcaaacagac
agtccctcttcagtcctaaatccacccccttcgctcaagaggaaaacaattcgggactat
tttgccagtagcacatcttga
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