Lolium perenne (perennial ryegrass): 127293876
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Entry
127293876 CDS
T08650
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit C
KO
K07466
replication factor A1
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03030
DNA replication
lper03420
Nucleotide excision repair
lper03430
Mismatch repair
lper03440
Homologous recombination
lper03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
127293876
03420 Nucleotide excision repair
127293876
03430 Mismatch repair
127293876
03440 Homologous recombination
127293876
03460 Fanconi anemia pathway
127293876
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lper03000
]
127293876
03032 DNA replication proteins [BR:
lper03032
]
127293876
03400 DNA repair and recombination proteins [BR:
lper03400
]
127293876
Transcription factors [BR:
lper03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
127293876
DNA replication proteins [BR:
lper03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
127293876
DNA repair and recombination proteins [BR:
lper03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
127293876
MMR (mismatch excision repair)
127293876
DSBR (double strand breaks repair)
HR (homologous recombination)
127293876
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
zf-CCHC
DUF936
Death
zf-CCHC_5
BRCA-2_OB1
Motif
Other DBs
NCBI-GeneID:
127293876
NCBI-ProteinID:
XP_051179531
LinkDB
All DBs
Position
1:complement(77223528..77227823)
Genome browser
AA seq
835 aa
AA seq
DB search
MQAPRLTSGAVKEIAELPKGLGTIQPVLQVADVRPITAKSAAGSDRFRMLVSDGVHSLQS
MLSTDLNRFVTDGTLRLGSIVHLLEVMCSDIQGRRIIIVCKLDILQSECDMIGKPKIYET
KSSREGQEPNLRANAVAPRVEQVANNLSYGEPYNGVHGTLDSSIGRTVRSGPNNVFFGSS
HDTMSAQNTMHTDVVQPNPQQPFLNSHQSQRFAVPSTAGGLGPPDNTYVRPAQPSYQQPP
PAYRNSGPVTKNEAGPRVTPISALNPYQGTWKIKARVTAKTHVNHYRNAQGPGKLFTFDL
LDAHDGEIRAKCFKDAVDQFYDLIEVGKVYLISGGGPGALKPAQKQYNHLNNDFEISMDA
RTSVEVCSSDDNSIRSQRFNFRQISEIANMDIGTMLDLLGVVTSVGPSSTVTRKNGVKAS
KRVLQLKDMSGCSVETTFWGNFCDAEGQQLQLLCDSGSSPILALKSGRICDFNGRSVGTI
SSSCLKINPDGPEAERLRQWYITEGKNAAVTSLSVGMSSMCRTDVRTTIAQIKEEGMGKS
EKPDWITVMGTVWNIKTDNFCYPACTGVVNGTRCTKKVTKDVDEMWQCESCEQSSQNCEY
RYMLPCQIQDHTGSTTYATAFQDAGEEIIGLPAQDLFTIKNEDQDDEKFAEIIQRARYQH
YLFKLKVKEETYNDEARVKCTIVKVQKLDDTATESRFLLAVIDGLLAEDGSGSTPAVNGG
AAINAGFTSNNTYTMNMVFPNQFGQQASLYGGMPCTPSATRYAQTGYASRDSPVQANSYG
PSAGGNTSTSLCYKCSQPGHFARDCLAQAAAPQRQIYGNGAATSGYNMQSYAGNF
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgccgcggctgacctcgggcgcggtgaaggagatcgcggagctccccaaaggg
ctgggcaccatccagccggtgctgcaggtggcggacgtgcggcccatcaccgccaagagc
gcggcggggtcagaccgcttccggatgctcgtctccgacggcgtgcactcgctgcagtcc
atgctctccaccgacctcaaccgcttcgtcaccgacggcaccctccgcctcggctccatc
gtccacctcctcgaagtcatgtgcagcgacatccagggccgcaggatcattattgtttgc
aaacttgatattctgcaaagtgagtgcgacatgatcgggaaaccaaagatttacgagact
aaaagctcacgtgaaggccaggagcctaacttacgggccaatgcagttgccccaagggtg
gaacaggttgctaacaatctgtcatatggtgaaccctacaatggtgtccacggcacattg
gactcttcgattggtcggacagtcagatctggacctaacaatgtgttttttggtagttct
catgatacaatgtcagcacaaaacacaatgcataccgatgttgtgcagcccaaccctcag
cagccttttctgaactctcatcaaagccaaaggtttgcagttcctagcacagctgggggc
ctcggccctcctgacaatacttatgttcgtcctgcacagccttcgtatcagcagccacct
ccagcatatagaaatagtggcccagttactaagaatgaagctggccctcgtgttaccccg
atttctgcattgaacccataccaaggcacatggaagataaaggctagggtgactgcaaag
actcatgtcaatcactacagaaatgcacaaggtccaggaaaactcttcacttttgatctc
cttgatgcacatgatggagaaattcgtgcaaaatgttttaaagatgccgttgatcagttc
tatgacctaattgaggttggtaaggtgtacttgatatctggagggggcccaggggcgctg
aaacctgcgcagaagcagtataaccatttgaacaatgactttgaaatcagtatggatgct
agaacatctgtagaagtttgttctagtgatgacaacagcatccgcagtcagcgtttcaat
ttccgacaaatcagcgaaatagcgaacatggatataggcaccatgctagatttgcttggt
gttgttacatcagttggcccttcttctacagtaacgaggaagaatggtgtgaaagcctcg
aaaagagtcctccaactgaaggacatgtctggttgcagcgtggaaacaaccttttggggt
aacttctgtgatgctgaaggtcagcagctgcagttgctgtgtgattctggttcgagtcct
atacttgccctgaaaagtggccgcatttgtgacttcaacggcaggtctgtgggcacaatc
agctcaagctgcttaaaaataaatccagacggtcctgaagcagaaaggctgaggcaatgg
tacataacagaaggcaaaaatgctgctgtcacttcgttgtctgtgggaatgtcaagcatg
tgccggactgatgtccgaactactattgcacagatcaaggaagaaggcatgggaaaatca
gagaagccagactggatcactgttatgggtacagtttggaacatcaagaccgacaatttt
tgttatccagcttgcaccggagtggttaatggtacccgctgcactaaaaaggtcacaaaa
gatgttgatgagatgtggcaatgcgagagctgtgaacagagctctcaaaattgcgagtat
aggtacatgctgccatgtcaaatccaggaccacaccgggtctactacgtatgcaactgca
ttccaagatgctggcgaggagataattggcctcccagcgcaagatcttttcacgataaaa
aatgaagatcaagatgatgaaaagtttgcagaaatcatacagcgggcccgttatcagcat
tacttattcaaactgaaagttaaggaagaaacgtacaacgacgaagcacgtgtgaaatgc
accattgttaaggttcaaaaattggatgacacggcaacggagagtcgctttcttcttgca
gtaatcgatggccttttggcggaggatggctcaggctcaacccctgcggtgaatggcggt
gctgctattaacgctggtttcacatccaataatacctacaccatgaatatggttttccca
aatcagtttgggcaacaagcgagcttatatggtgggatgccttgtacaccatctgcaaca
cgatatgcacagactggttatgcctctagggactctccagtgcaggcaaactcctacggc
ccttcagctggtggcaacaccagtactagtctatgctataagtgtagtcagcctgggcac
ttcgctagagactgtctggcgcaggctgctgctccccagcgccagatttacggaaacggc
gccgctacatcaggatacaacatgcagtcctatgctggtaatttctga
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