Lolium perenne (perennial ryegrass): 127293902
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Entry
127293902 CDS
T08650
Name
(RefSeq) protein ANTHESIS POMOTING FACTOR 1
KO
K14962
COMPASS component SWD2
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127293902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lper03019
]
127293902
03036 Chromosome and associated proteins [BR:
lper03036
]
127293902
Messenger RNA biogenesis [BR:
lper03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
127293902
Chromosome and associated proteins [BR:
lper03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
127293902
COMPASS/SET1 complex (yeast)
127293902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
PQQ_3
PQQ_2
Ephrin
Motif
Other DBs
NCBI-GeneID:
127293902
NCBI-ProteinID:
XP_051179569
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All DBs
Position
4:complement(120299252..120303781)
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AA seq
330 aa
AA seq
DB search
MQGGEKERVTMEVTDEMIKTMEVGLAFRDYNGRISSMDFHSKATNYFVTASDDESIRLYD
IQSAVCLKTINSKKYGVELVCFTTNPSLVLYSSKNGWDESLRLLSLNDNRFVRYFKGHLD
RVVAMSLCYEKDSFLSASLDRTVLLWDLRADKAQGLLRVQGRPAVSYDDQGLVFAVAYGG
FIRMFDARKFEKGPFDIISVGNDDSEANVIKFSSDGRRLLLTTKAGHIHVLDSFHGNHIA
TFKVKPAVTNSTLEASFSPDGNHVISGSGDGSVYAWSVRSGKKVARWGSTDNEPPLVRWA
PGSLMFLTGSSELSCWVPDLSKLGSFAVTK
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggtggggagaaggagagggtgaccatggaggtcaccgacgagatgatcaagacc
atggaggtcggcttggccttccgggactataatggcagaattagttctatggattttcac
agcaaggctacaaactattttgtgacagccagtgatgatgaatcaatacgcctatatgac
attcaaagtgctgtatgtttgaagaccattaatagcaaaaaatatggggttgaattggtg
tgcttcactacgaacccaagtcttgtcctgtattcctcgaagaatggctgggatgaatct
ctgcggctgctctctctgaatgataaccggtttgtaagatatttcaaaggccatcttgac
agggttgttgctatgtcgttatgctatgagaaagatagttttctttctgcttcacttgat
cgaactgttctcctttgggatctgagggccgacaaagcacagggcttactgcgtgtgcaa
gggaggcctgcagtttcatatgatgatcagggtttagtttttgcagttgcgtacggtggt
ttcataaggatgtttgatgctcgaaaattcgagaaggggccttttgatattatctctgtt
ggtaatgatgattctgaagccaatgtcataaagttcagcagtgatggacggcgtctactt
ttgaccaccaaagcagggcatattcatgtgctagattcatttcatggaaaccatatagca
actttcaaagtaaaaccagctgtcaccaattcaacattggaggcatcattcagccctgat
ggaaaccatgtcatatctggctctggtgatggtagcgtttatgcttggagtgttagaagt
ggaaagaaagtagcacgctggggaagcacagataatgaaccaccattggttaggtgggct
ccaggatcattgatgttcttgactggatcttcagaactatcctgctgggtcccagaccta
tccaagctgggatcgtttgccgttactaagtaa
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