KEGG   Lolium perenne (perennial ryegrass): 127294675
Entry
127294675         CDS       T08650                                 
Name
(RefSeq) THO complex subunit 4A
  KO
K12881  THO complex subunit 4
Organism
lper  Lolium perenne (perennial ryegrass)
Pathway
lper03013  Nucleocytoplasmic transport
lper03015  mRNA surveillance pathway
lper03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lper00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    127294675
  09122 Translation
   03013 Nucleocytoplasmic transport
    127294675
   03015 mRNA surveillance pathway
    127294675
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lper03019]
    127294675
   03041 Spliceosome [BR:lper03041]
    127294675
Messenger RNA biogenesis [BR:lper03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     127294675
    TREX complex
     127294675
Spliceosome [BR:lper03041]
 Complex C
  Other components
   EJC/TREX
    127294675
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    127294675
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_3 RRM_10 RRM_fung
Other DBs
NCBI-GeneID: 127294675
NCBI-ProteinID: XP_051180498
LinkDB
Position
4:172419997..172422074
AA seq 263 aa
MADALDMSLDDIITKNKPSHSRGRGRRNPFSASGGPAPARRRFHRRAANRSAAAPYHQLN
FQPQQVPPAFGYVAQPMAMVTAPSTGLDTAPTKLYISNLDSNVSNEDIKDLFSEMGEIKR
YSINYDKSGRSKGTAEVVFSTKAEALAALKKYNNVHLDGKPMKIEVIGTNIEAPAPAIFA
FAPPPLPGNFNFPPKSGPGRGAGGRGWSRGGGGFSGRGRGRDGGRGRGASRGRGRGGRGN
VEVSAADLDADLDKYHSAAMQTS
NT seq 792 nt   +upstreamnt  +downstreamnt
atggcggacgccctggacatgtcgctggacgacatcatcaccaagaacaagccctcgcac
agccgcggccgcggccgccgcaacccgttctccgcctcgggaggacccgcgcccgcgcgc
cgccgcttccaccgccgcgccgccaaccgctccgccgccgcaccctaccaccagctcaac
ttccagccgcagcaggtgccgccggctttcgggtacgttgcccagccgatggccatggtg
acggcgccttccactggcttggacaccgcgcccaccaagctctacatctccaacctcgac
tccaacgtctccaacgaggacatcaaggatctgttttccgagatgggcgagatcaagcgg
tactccattaactacgacaaaagtggaagatcgaagggaactgcagaggttgtcttctcg
acaaaagcagaagctttagctgctctcaaaaagtacaacaacgtgcaccttgatggcaaa
cctatgaaaatcgaggtcattgggacaaacattgaggcaccagcacctgctattttcgct
ttcgctccacctccactacctggaaacttcaattttcctcccaaaagtggacctgggagg
ggtgctggtggtcgaggatggtctcggggcggaggtgggttcagtggtcgtggccgaggg
cgtgatggtggccgagggcgtggtgctagccgtgggcgagggaggggagggcgtggcaat
gtggaggtttctgctgcagacctcgacgctgacttggacaagtaccactcggctgcgatg
caaaccagctag

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