Lolium perenne (perennial ryegrass): 127294677
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Entry
127294677 CDS
T08650
Name
(RefSeq) nuclear pore complex protein NUP98A
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127294677
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lper03019
]
127294677
03036 Chromosome and associated proteins [BR:
lper03036
]
127294677
Messenger RNA biogenesis [BR:
lper03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127294677
Chromosome and associated proteins [BR:
lper03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
127294677
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
127294677
NCBI-ProteinID:
XP_071675002
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All DBs
Position
4:complement(172273636..172280204)
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AA seq
960 aa
AA seq
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MFGSSNPSGQSSAGSSPFGQQASSSNPFGTQQQAAFGQANAATNNPFAPRPFGSPTPAFG
GTSSPFGGGTSAFGQPSAPAFGAAATGAFGQHPAPAFGATATGAFGQQPAPAFGSTSTGA
FGQQQTPAFGSTSTGAFGQQQTPAFGSTSTGAFGQQPTPVFGSTSTGAFGQQPTPVFGST
STGAFGQQQTPAFGSTSTGVFGQPTTPAFGSTATGAFGQPATPAFGSPSPSPFGSSTSAF
GAPPAPAFGATTSNPGTGSLFGQKSSFGGFGSSPNQSTTFGNNNFGTTTTPTFGVSTSTS
LFGAPGTSTFGSTTTPGFGSSPSFGQSGAATSNTLFGTTPSSPFGLPTAPPTFGQTTFGN
QSGGTRIQPHVQTPDPDGATSGSQASKLDSISAMPAYKEKSHEELRWEDYQRGDKGGPNT
TPVVNNFSPSPQPSFPISQPAPVNPFSSISNSTGAFGTTPSLFPSPGTTLFGQSTGSPFQ
ANTSQSLFANTTPSIFGSSSAITTPFSFGPSFNNNSQSAGLFPSSPSPAIGQQPSSHSFN
QQTTSSSAFSTSIFNNTTNVGTAGGQFVPTSSPFPMFPQPAPVQPSSSFSFQPQGQPGGF
SGVSKPMNMAPFGQQTSSQSSMVMQPTLVSNPFGTLPAMPQMSIGNGGSSPSIQYGISSL
PVAEKPHLSRTLSMVVPRHLSQRRIKLLPRKYNAASDGKVPFFADDEESSVTPKADAFFI
PRENPRSLIIRQTDQWPSRSAVDRQPIPRDSAHLDKDKDAFVGRERNKAAMSPARSGQAG
NGHDASSEPEAFVRHVNGASIEKMMPKLSQADYFTEPSLEELAAKERSEPGYCRQVRDFV
VGRQGYGSIKFLGETDVRGLDLESVVEFNNREVVVYKEDSEKPPVGEGLNKAALVTLLNI
KCMNRKTGEPCTEGPRLDKFKETLVKTAKEQGAEFVSFDGAKGEWKFRVKHFSSYGFGES
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgttcggctcttccaacccgtccgggcagtcgtccgccggcagcagccctttcgggcag
caggcctcgagcagcaacccattcgggacgcagcagcaggctgcctttggccaggccaat
gccgccaccaacaaccccttcgcgcctaggccgtttggcagcccaacccccgccttcgga
gggaccagctcgccgttcgggggtggtacgtccgcctttggccagccatccgctccggcc
tttggggctgcagccactggcgcctttggccagcatcctgccccagcgtttggggctaca
gccacaggcgcctttggccagcagcccgccccggcgtttgggtccacgtcaaccggcgcc
tttggccagcaacaaacaccggcgtttgggtccacgtcaaccggcgcctttggacagcag
caaaccccggcgtttggctcgacgtcaaccggcgcctttggccagcaacccacaccggtg
tttggttcgacgtcaaccggagcctttggccagcagcccaccccggtgtttggctcgacg
tcaaccggcgcctttggccagcagcaaaccccggcgtttggctctacatcaaccggcgtc
tttggccagccaaccacgccagcgtttggctcgacagcaactggcgcctttggccagcca
gcaacgcccgcgttcggcagcccgtcgccctctccgtttgggagctccacgtcggctttc
ggtgcgccgccagcgccggcgtttggcgccacaacctccaaccctggcaccggatctctg
tttggacaaaagtctagtttcggtggttttggttcatctcctaaccagtctactacattt
ggcaacaacaattttggcaccacaactactccgaccttcggtgtctctacatcaacatcc
ttatttggtgctcctggcacctcaacgtttggttcgaccactactcctggatttggatct
tctccgtcttttggacaatcaggagctgcaactagtaacacgctgttcggaacaactccg
tcttctccatttggcttgccgacagcaccaccaacgtttgggcaaactacatttgggaat
caatctggaggaaccagaatacagcctcatgtacaaacaccagatcctgacggtgctacg
agtggttctcaggcttcaaaacttgattccatatcagctatgcctgcatacaaagagaag
agtcatgaggaattgaggtgggaagattaccagcgtggggacaaaggtggaccaaacaca
actccagtggtgaataacttctcgccatctccacagccaagttttccaatcagtcaaccg
gcgccagtgaatccattttctagtatctcaaattctactggtgcttttggtactacgccg
agcctgtttccgtcccccggaacgaccttgtttggacaatcaactggttctcccttccaa
gcaaacacttcacaatctctgtttgcaaataccactccttcaatattcggctcgtcatcg
gcaatcacgactcctttcagttttggcccatcctttaacaataactctcaatcagctggg
ctgtttccgtcttcgccttcccctgcaattgggcaacagccatcgagccactcatttaac
cagcagacgacaagcagttcagctttctccaccagtattttcaacaacacgactaatgtt
ggaacagccggaggacagtttgtccccacatcttcaccttttccaatgtttccacaacct
gcccctgttcaaccttcaagttcgttctcattccaacctcagggccaaccaggtggattc
tctggagtttccaaaccgatgaatatggccccatttggacagcaaaccagtagtcagtcc
agtatggtaatgcagccgactcttgtttcaaatcccttcgggacactcccagcgatgcct
cagatgtccattgggaatggtggatcctcaccttccatccaatatggaatatcaagttta
ccggttgctgagaagccccatctgagtagaacattatcaatggtggtgcctaggcatttg
tcacagaggaggataaaactgttgccacggaagtataatgcggcatctgatggaaaggtt
ccgttctttgctgatgatgaagaatcttccgtaacgccaaaagcagatgcctttttcatc
cctagagaaaacccaagaagtctgataatccgtcaaacagatcagtggccttcacgtagt
gcagttgaccgacaaccaattccaagagattcagctcatcttgacaaagacaaagatgct
tttgttgggagggagcgcaataaggctgccatgtcaccggctcggtctggtcaagcagga
aatggtcatgatgcatcaagtgagcctgaggcttttgttcggcatgtgaatggtgctagc
attgagaagatgatgcctaagctctcccaggcagattacttcacggagcctagcctagag
gagcttgcggcgaaagaacgttctgaaccaggctactgccgtcaggttagagactttgtt
gtcggacgtcaaggctatggcagcatcaaattcttgggagaaacagatgtgaggggcctt
gatctggagtcggtggtggaattcaataaccgtgaagtggtcgtgtacaaggaggacagc
gagaagcccccagttggcgagggcctgaacaaagctgcattggtgactcttttgaacatc
aagtgcatgaataggaagacaggcgagccctgcaccgagggtccgaggctggacaagttc
aaggagacgctggtgaagacggccaaggagcagggagctgagttcgtgtcatttgacggc
gccaagggcgagtggaagttcagggtgaagcacttcagctcctatggatttggcgaaagc
tga
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