Lolium perenne (perennial ryegrass): 127294766
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Entry
127294766 CDS
T08650
Name
(RefSeq) pre-mRNA splicing factor SR-like 1 isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127294766
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lper03041
]
127294766
Spliceosome [BR:
lper03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
127294766
Complex C
U4/U6.U5 tri-SnRNP related factors
127294766
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Gene cluster
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
127294766
NCBI-ProteinID:
XP_051180614
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All DBs
Position
1:59849859..59854066
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AA seq
477 aa
AA seq
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MEIQTSGKPIDMLMEKVLCMNIVSSDYFRELYRMKTYHEVIDEIYYHVDHVEPWMTGNCR
GPSTAFCLLYKFFTMKLTVKQMHGLLKHPDSPYIRAIGFLYLRYVADPKILWTWYEPYLK
DDEEFSPGSNGRMTTMGVYVRDLILGQLILQFSCEVDFYTTWDYFSMILWLQISLTRLFC
SNGCEQCLILRLLSLSSETMPTNWTIFLVRQVMVPQHSLFIYYFDSILPRVPVPVVREVT
ANLEKMKLPTKLSGATGDSSRHGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRR
TFTQDDHRRSSSPFRRSRSRDSPLNGRSSCDRDTNRSSRDREHDRSSRDKDYDRDIRDYD
RGSRDRDYHRSRHSEERRDSRREHDISRHRRSSSRHRSRSRSRSRSRSRSRSRSRNEPRS
SPFGDTNKEKATAASNLAKLKDLYGDVTEKKDVGDAKPRHHDSCAEEVIMLGGSRWR
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggagatacagacttcagggaagcccattgatatgctgatggagaaggttctttgtatg
aacatcgtctcttctgattacttcagggagctctacaggatgaagacctatcatgaggtc
attgacgagatctactaccatgttgatcatgtggagccttggatgactggcaattgcaga
ggcccctccactgcattttgtcttctctacaaatttttcacaatgaagcttactgtgaaa
cagatgcatggtttgttgaagcatcctgactccccgtacattagagctataggattcctg
tatcttcgatatgttgcagatccaaagatcctatggacatggtacgagccctacttgaag
gatgatgaggaattctcacctggatctaatggtcgcatgacaaccatgggtgtatatgta
cgtgatcttatacttggacagctaatccttcagttctcatgtgaagttgatttctatact
acatgggattatttttccatgatattgtggcttcagataagtttaactcgcctattttgt
tctaatggctgtgaacagtgtttaatcctgcgtttgttgtctttatcttcagaaactatg
ccaactaactggacaattttcttagtcaggcaagtcatggttccacaacatagcctgttc
atatactacttcgacagtatccttccaagagttcctgttccagtagttcgtgaagtaaca
gcgaatctcgagaagatgaagctgccaacaaagctttctggggcgactggagactccagt
cgtcatggatcagaggatacggcccgtcggcccccttctgttaaagcttctttgtcagtt
tctttcggacagcgtgctccacaccgtgcttccacaagggattcatccccagttcggcga
acatttacccaagatgatcatcgaagatcatcttcaccatttcgtcgtagtagaagccgg
gacagccctctcaatggccgttcaagctgtgaccgagatactaaccgttcaagccgtgac
cgagaacatgatcgttcaagccgcgacaaggattatgatagggacatcagagactatgac
cgtggcagcagggaccgcgactaccacaggtccaggcattcagaagaaagacgagatagc
cgaagggagcatgacattagtagacacaggcgctccagctcacgtcataggagcagaagc
aggagccgcagcaggagccgaagccggagcagaagtagaagcaggaatgaacctcgatca
agtccatttggggacacaaacaaggagaaggcaactgctgcgagcaacctagccaaactt
aaagacctgtacggtgatgtaaccgagaagaaggatgtcggtgatgccaagccgcggcat
catgattcatgcgccgaggaggttatcatgctgggaggctctagatggaggtaa
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