Lolium perenne (perennial ryegrass): 127294795
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Entry
127294795 CDS
T08650
Name
(RefSeq) SWI/SNF complex subunit SWI3C homolog
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127294795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lper03021
]
127294795
03036 Chromosome and associated proteins [BR:
lper03036
]
127294795
Transcription machinery [BR:
lper03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
127294795
Chromosome and associated proteins [BR:
lper03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
127294795
PBAF complex
127294795
GBAF(ncBAF) complex
127294795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
ZZ
Motif
Other DBs
NCBI-GeneID:
127294795
NCBI-ProteinID:
XP_051180651
LinkDB
All DBs
Position
4:complement(149698615..149706881)
Genome browser
AA seq
775 aa
AA seq
DB search
MPRKASSTPDSRLKWRKRKRNPDASPTPSAAGDHSDDSDSAAANDEDDTAVPSAAADDEI
LAGAAARDLREAEVLSPAEAISAFPAATRRKVNRPHPSVLAVVAAERSACAGDVSALVPP
ALENISHGQLQVLSGALPDHPSLSTDPDMPSSYVCTPPPLMEGHGVPKQFQGRLHVVPKH
SDWFSPGTVHRLERQVVPHFFTGKSPGNTPGKFITLRNKVIAKYLENPGKRLAFADCQGF
VVNTGELYDLSRIVRFLDAWGIINYLAVGLVHRGLRAAASLLREEPAGGLQLLTAPLKSI
DGLITFDRPKCSLRVEDIALLASSLSNSEVLDFDAGAEFAELEGKIRERLSESSCSYCSQ
SLSSLHYQSQKEVDIALCSNCFHDSRYITGHSSLDFQRVNGDRDGSENDGDNWTDRETLL
LLEGIEKHNDNWNNIADHVGTKSKAQCIYHFIRLPVEDSLLETIEVPDASMPVQTNGHPH
SDSNGNLPQSVQHGNQLPFISSSNPVMSLVAFLASAIGPRIAASCASAALSALTREDDPR
VISESMHADDRTHGAHQNFSDHNGAPSSSISPENVKHAALCGLSAAAMKSKLFADQEERE
IQRLAAIVINHQLKRLESKLKQFAEVETLLLKECEQVERARQRISAGRIQVMSGRLNHTG
TRLPKPNGGSSTVASNPVNISPRPVGKPGSTAEATRPASSTNIMHGQGHPQMPFLQRQPQ
MLSFGPRSPLSANQTQPSAQASNIMFSSAAMPNSITPSHNHQLLRSSSGNNSSLG
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcaaggcctcctctacgccagattcgcgcctcaaatggcggaagcggaagcgc
aaccccgacgcctccccaacgccgtcggccgcgggcgaccactcggacgactccgactcc
gccgccgccaacgacgaggacgacacggccgtcccgtcggctgcggctgacgacgaaatc
cttgccggtgccgcggccagggacctccgtgaggcggaggtgctctccccggccgaggcc
atctccgccttccctgccgccacccgccgcaaagtcaaccggccgcacccgtccgtcctg
gccgtcgttgcagccgagcgatctgcgtgcgcgggagatgtctctgccttggttccaccg
gcattggagaacatctcgcacgggcagctccaggtgctctccggggccctgcccgaccac
ccgtccctttcgacggatcctgacatgccgtcttcttatgtgtgcacgccaccgcccctc
atggaggggcacggcgtgcccaagcagttccagggtcgcctccatgtcgtgcccaagcac
tcagattggttctctcctgggacggtgcacaggctggaaaggcaggtagtgccacacttt
tttacagggaaatctccggggaacacgccggggaagttcatcacgttgcggaataaagtt
attgccaagtatttggagaatccaggcaagaggcttgcttttgcagactgccaggggttt
gttgttaacacaggtgaattatacgatctgagtaggattgttcggttcttggatgcatgg
gggatcatcaattacctcgcggttgggttggtgcaccggggtctgagggcggcagcatca
cttctaagggaggaaccagcaggggggttgcagctgttgactgcaccgctgaaatcaatt
gatggtttaattacgtttgatcggccaaaatgtagtctccgagttgaagacattgccttg
ctggcatcgtctttatcaaattcagaggtgttggattttgatgctggtgctgagtttgcg
gaattggaaggaaagattagagaacggttatcagagagctcttgcagttactgctcacaa
tctttaagcagtttgcactatcagtcacaaaaggaggtagatattgctctttgctcaaat
tgcttccatgattcacgatatattactgggcattcaagcttagattttcagagagtcaat
ggagatagagatggatcagaaaatgatggggataactggactgatcgagaaacgttattg
ttgttggagggcatagagaagcacaatgacaactggaataacatcgcagaccatgttgga
acaaagtcaaaggcacagtgtatttaccattttattcgtcttccagtggaggatagtttg
ttagagaccattgaggtaccagatgcatccatgccagtgcaaaccaatggacatccacat
tcagattcaaatggaaatctgcctcaaagtgttcaacatggaaaccaactcccgttcatc
agttcttctaatccagtcatgtcgttggttgcgttcttggcctctgcaataggaccaaga
attgcagcatcatgcgcaagtgcagcattatctgctttaacacgagaggatgatcctagg
gtgatttctgaaagcatgcatgctgatgataggacccatggtgcacatcaaaactttagt
gaccataatggtgctccatcatcgtccatttctccagaaaatgtgaagcatgctgcgttg
tgtggtttgtcggcagcagcaatgaagtctaaactctttgcggatcaagaggaacgtgaa
atccaaagactagctgctatcgtgataaatcatcagctgaagaggttggagtcaaagctg
aagcagtttgctgaagttgagaccttgcttttgaaggaatgcgagcaagtggagagagcg
aggcagaggatttcggctggccgcatacaggtgatgtcaggccgcttgaatcacactgga
actaggctgcccaagcccaacggtggcagtagcaccgtggcatctaatccagtgaacata
agccctagaccggtgggcaaaccaggctccacggctgaagccaccagaccagcctcatcc
accaatatcatgcatgggcaggggcaccctcagatgccattcttgcagaggcagccacag
atgctctcgtttggtcctcgctcgccactttcggctaaccagactcagccatctgcacag
gcgtcgaacattatgttcagctctgctgccatgcccaattcaataactcctagtcacaat
catcagctgttgaggtcgtcttcaggaaacaattcaagtctaggatag
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