Lolium perenne (perennial ryegrass): 127294884
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Entry
127294884 CDS
T08650
Name
(RefSeq) putative tRNA pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
lper
Lolium perenne (perennial ryegrass)
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lper03016
]
127294884
Enzymes [BR:
lper01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
127294884
Transfer RNA biogenesis [BR:
lper03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
127294884
Prokaryotic type
127294884
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
127294884
NCBI-ProteinID:
XP_051180749
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All DBs
Position
4:complement(267162425..267166394)
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AA seq
525 aa
AA seq
DB search
MAAAVAAATRSSWLLRGPFSSTILARCAYPRILRTTICFSHSASAPALASASLTPNTPSP
PPTTCSGDGGGGMRWESTRKKRVVLRIGYVGSEYRGLQKQRELSADSTIESVLESAIFKA
GGILESNYGKLQKVGWERSSRTDKGVHSLATMISLKMEIPDRAWDRDPDGIALANIINSN
LPNSIKVFSILPAQRSFDVRRECLYREYFYLLPAEIIGIKNGSTAEEIQEHLIEFNNILK
GFKGNHPFHNYTARAKYRKVLAGAQRRAKETSTTVNSISEMIVDQSTSGEGATSNPDEEY
SDFPSILDSSAPEDNCKTDNPEVPESSVQIQARWLHEPNESDRLSASHFRDILNFSCGDL
QSSSGTQFVELTICGVSFMLHQIRKMVGTAVAVKRGLLPKDIIELSLAKFSRIVLPIAPS
EVLILRDNSFCTRNKQGSIVRPGIQSITESKEMKKGVTEFYRAALLPELAKYLDPSQPPW
QEWVENLDHFTGIPDPQLDEVRTAYRVWRDDYDRVKMARKSAGSG
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgccgtcgccgccgccacgaggtcgtcgtggcttctccggggacccttctct
tccactatcctcgcacgctgcgcatatcccaggatccttcgtactaccatatgcttctcc
cattctgcctccgcccccgccctcgcctccgcctccttaacaccgaacacgccttctccc
ccgcctaccacctgctccggcgatgggggtggagggatgaggtgggagtctacgcggaag
aagagggtcgtgctccgcattggctacgtcggcagcgagtaccgaggtctccagaagcag
cgggagctcagcgccgattcgaccattgagtcagtcttggagtctgccatcttcaaggca
gggggcattcttgagagtaattatggaaagctgcaaaaagttggttgggaaaggagtagc
cgaactgataaaggggtacattcactggctacaatgatctctctgaagatggaaatccct
gatcgagcatgggacagggatcctgatggcattgctcttgcgaatatcatcaactcgaat
ttaccaaacagtatcaaagttttcagtatcttgcctgcacaaaggagttttgatgtaagg
agggaatgcttgtaccgggagtacttctatcttctgcctgctgaaattattggaattaaa
aatggttctaccgctgaagaaatacaggagcacttaattgaattcaacaacattctgaaa
ggtttcaagggaaaccacccatttcataattacactgctcgtgcaaagtatagaaaagtt
ctagcaggagcacaacgaagggccaaagaaacaagcacaacagtaaattccatctccgaa
atgattgtggaccaaagcacttctggtgagggcgctacttccaatccagatgaggaatac
tcagactttccgtcaatacttgattctagtgcaccagaagacaactgcaagacggataat
cccgaagttcctgagagtagtgtgcagattcaagctagatggctccatgagcctaatgaa
agtgatagactaagtgcatcacacttcagagatatcctcaacttctcctgtggagatttg
cagagttcatcaggaacccaatttgtggaactgacgatatgtggagtatcttttatgctg
catcagatccggaagatggttggcaccgctgtggcagtgaagcgtggactactaccgaaa
gatatcatagaactttctctggcaaagttttcccgcattgttctaccgatcgccccatcc
gaagttctgatccttcgagacaacagtttctgtacgaggaacaagcaagggagcatcgtt
cggcctggcatccagtcgattaccgagtccaaagaaatgaagaagggtgtaaccgaattc
tacagggctgctcttctgccggagctggcaaagtacttggatccgtcccagcctccgtgg
caggaatgggtggagaacttggaccacttcaccggcataccagacccccagctggatgaa
gttcggacggcctatagagtttggagagacgactacgaccgagtgaagatggctcgaaag
agtgctggcagcggctag
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