Lolium perenne (perennial ryegrass): 127295165
Help
Entry
127295165 CDS
T08650
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03030
DNA replication
lper03410
Base excision repair
lper03420
Nucleotide excision repair
lper03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
127295165
03410 Base excision repair
127295165
03420 Nucleotide excision repair
127295165
03430 Mismatch repair
127295165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lper03032
]
127295165
03400 DNA repair and recombination proteins [BR:
lper03400
]
127295165
DNA replication proteins [BR:
lper03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
127295165
DNA repair and recombination proteins [BR:
lper03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
127295165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
AAA_22
AAA_30
RCF1-5-like_lid
AAA_19
RuvB_N
AAA_assoc_2
nSTAND3
AAA_5
Sigma54_activ_2
PTCB-BRCT
AAA_16
AAA_18
Gp44_lid
AAA_24
AAA_14
BRCT_2
Zeta_toxin
AAA_2
NTPase_1
AAA_17
RNA_helicase
AAA_33
RsgA_GTPase
Mg_chelatase
TsaE
DNAX_ATPase_lid
Motif
Other DBs
NCBI-GeneID:
127295165
NCBI-ProteinID:
XP_051181025
LinkDB
All DBs
Position
4:complement(200862954..200873754)
Genome browser
AA seq
1050 aa
AA seq
DB search
MSSDIRKWFMKPHDKNAGAAKPSGTGTGAAAAKKPVLSIPEKPAPSSVSGSQDASARRKT
SKYFAPKTEKDSDVTDKSLPKRKLHKSSDQLEDDSKPLAANRVLKAEEEDDDDDFVAPSK
RKTPVKPPPSKKLKAASNDDDEDERMDEDAKTPSKAAGRGRGRGRGGRGAVHAKTATPDD
DVGGGEDRMDEDAKTPSKSTGRGRGRGRGGRGGGTAHGKTTGLDDDAEEDRMDEDDKTPS
KAAGRGRGGRGAGSTPGGRGRGGGGRGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVI
SGTLDSLEREEAGDVIKRYGGRVTGSISKKTNYLLADEDVGGVKSNKAKDLGVPFLTEDG
LFDMIRKSKPAKAPSNKHENNSNSEKLQKSQTKSSPVKVEKRAVEQVSTMDKSIASKSEI
ASTNNQKAKVVDRGSLQWTEKYRPKVPNDIVGNQSMVKQLHDWLKSWEEQFLHPGQKGKG
KKQTDGGAKKAVLLSGPPGIGKTTTAKVVSQMLGLQAIEVNASDSRGKADSKIEKGVGGS
TSNSIKELISNATLNYSDNRTKKPKAVLIMDEVDGMSAGDRGGVADLIASIKISKIPIVC
ICNDRFSQKLKSLVNYCLLLNFRKPTKQQMGKRLMEIARKEGIEAQENAMEELAERVHGD
IRMALNHLQYMSLSQSVVKYDDIRLRLNSSAKDEDISPFTAVDKLFGFNGGRLRMDERMD
LSMSDPDLVPLIIQENYINYRPSAVGKDDSGVKRMNYLARAAESLADGDIVNVQIRRYRQ
WQLSQAACFASSIVPAALMHGNREVLEAGERNFNRFGGWLGKHSTTNKNKRLMEDVHSHI
LASQQANVDREALRLDYLTLLLRQLTGPLKTMPKDEAVQKVVEFMDTYCLTQEDFDTLVE
LSKFKGHPNPMDGIQPAVKSALTKAYKQGSSCRVIRSADQINIPGMKKTLKKRVAAILEP
LDESLPEENGVASAEGDEDEPSDAENDDELAPGDSKPTLDLQSDKKKGIQVQLDLKTNGS
GSSAKKAPAKSKASGSAGKAAGGSAGKRKR
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggacatcaggaaatggttcatgaagccgcacgacaagaatgctggtgcggcc
aagccatccggcaccggtactggcgccgccgcggccaagaagcccgtgctcagtattcca
gagaagcccgcgccatcttcggtctctggcagtcaagatgcttcagctagaaggaagaca
agcaagtacttcgcacccaaaacagaaaaagattcagatgttaccgacaagagtttgcct
aaaagaaaacttcacaaaagcagcgaccaacttgaggatgacagcaagcctttggcagca
aacagagtccttaaggctgaagaagaagacgacgacgatgactttgtggcgccttccaaa
aggaaaacccctgtgaagccaccaccatcaaagaagttgaaggctgcatctaatgatgat
gacgaggatgaaaggatggatgaagatgccaagaccccttccaaagcagctggaagggga
agagggcggggaaggggaggaagaggagcagtccatgcaaagactgctactcctgatgat
gatgttggtggtggggaggacaggatggatgaagatgctaagactccctccaaatcaact
ggaaggggaagaggaaggggaaggggtggaagaggcggaggaacagctcatggaaagact
actggtcttgatgatgatgctgaggaggacaggatggatgaagatgataagaccccttcc
aaagcagctggaaggggaaggggaggaagaggagcaggatctactcctgggggaagaggg
agaggagggggtgggagaggtttcatgaattttggtgaaaggaaggatcctcctcacaaa
ggggagaaggaagtcccagagggtgcccctgactgtttagctggtctgacatttgtcata
agtggcactcttgacagtcttgaacgggaggaagcaggtgatgtaataaagcgttatggg
ggccgtgtgactggctctattagtaaaaagacgaattacctgttggctgatgaagacgtt
ggtggtgtgaaatctaacaaagcaaaagatctgggggtcccattcttgactgaagatggt
ttatttgatatgatccggaaatcaaagcctgcaaaggctccttcaaacaaacatgaaaat
aacagcaactctgaaaagctacagaaatcacagacgaagagctctccagttaaagttgaa
aaaagagctgttgagcaagtcagtaccatggacaagagtattgcatcaaagagtgaaatt
gcttccactaacaaccaaaaggccaaggttgttgaccgtggttctttgcaatggacagaa
aaatatcggccaaaagttccgaacgacatagtaggcaaccaatcaatggttaaacaactt
catgattggttgaaaagttgggaggaacaattccttcatcctggccaaaagggtaaagga
aagaagcaaaccgatggtggagctaaaaaggctgtattgctgagtggacctccaggtatt
ggtaagaccacaactgcaaaagttgtcagtcagatgcttggattgcaggccattgaggtt
aatgcaagtgatagccgcggtaaagcagactccaagatcgagaaaggtgttggggggagc
acatcaaattctatcaaagagcttatcagcaatgccactctcaattatagtgacaaccgg
acaaagaagcctaaggctgtactcatcatggatgaagttgatggtatgtctgctggcgat
aggggtggagttgctgatcttattgccagcatcaagatatccaagattcctatagtttgc
atttgcaatgaccgttttagccagaaattgaagagccttgtaaattactgtttgctactc
aacttcaggaaaccaacaaagcaacagatgggtaagaggttgatggagattgccaggaaa
gaaggtattgaagctcaagagaatgcgatggaagagcttgcagaaagagtacatggagat
attcgcatggcactcaaccatttgcaatacatgagtctctcacagtctgtggtcaaatat
gatgatataagattacgccttaatagtagtgccaaagatgaagatatctctccattcacg
gctgtggacaagctgttcggtttcaatggtgggagactaaggatggatgagagaatggat
ttgagcatgagcgatcctgatttagttcccttgattatacaggaaaattatatcaattat
cggcctagcgctgtggggaaggatgacagtggagttaaaagaatgaattatcttgcccgt
gccgctgagtctctagcagacggtgatattgttaatgtacaaataagaagatatcggcag
tggcagctgtcccaagctgcttgttttgcttcatctatagtacctgctgctttgatgcat
ggaaatagagaagtccttgaagcaggtgaacggaactttaataggtttggtggatggttg
ggcaagcactcaactactaacaaaaacaaaagactaatggaagatgtccatagtcatatt
cttgcatcgcagcaagcaaatgtggacagggaggcgttgaggctcgattatctcactctt
ctcttgagacaattgactggcccactgaagacaatgcctaaggatgaagctgtccaaaaa
gtggtggagtttatggatacttactgtttaacccaggaagactttgacacacttgttgaa
ttatccaaatttaagggccatccaaatcctatggatggtattcaaccagctgttaaaagt
gccttgacgaaggcttacaaacaaggaagtagttgtcgtgttattcgatcagcagatcaa
ataaatatcccaggcatgaaaaaaacattgaagaaacgagtagcagcaatcttggagcca
ttggatgagagtttgcctgaagaaaatggagtagcatcagctgaaggtgatgaagacgaa
ccttctgatgctgaaaatgatgatgaacttgctcctggtgactcgaagccgacactggac
ctgcagagtgataagaagaaaggaattcaagtgcagctggacctgaagaccaatggcagc
gggtcaagcgcaaagaaggcgccagcaaaatcaaaagcttcagggtctgcagggaaggct
gcgggaggctcagccgggaagagaaagaggtag
DBGET
integrated database retrieval system
