Lolium perenne (perennial ryegrass): 127295303
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Entry
127295303 CDS
T08650
Name
(RefSeq) serine--tRNA ligase, chloroplastic/mitochondrial isoform X1
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
127295303
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lper01007
]
127295303
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lper03016
]
127295303
Enzymes [BR:
lper01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
127295303
Amino acid related enzymes [BR:
lper01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
127295303
Transfer RNA biogenesis [BR:
lper03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
127295303
Prokaryotic type
127295303
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Ig_VWDE
Motif
Other DBs
NCBI-GeneID:
127295303
NCBI-ProteinID:
XP_051181191
LinkDB
All DBs
Position
4:complement(193643811..193650586)
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AA seq
511 aa
AA seq
DB search
MLTCGRYLSSAAATTLSLSPHRNLTSSFLRRHPLRFLTSAAAATAVQPDTRGGGGGGGAG
GGATTPKWKAAIDFKWIRDNRDAVATNILNRNSVANLDVVLQLYDQYLALQKEVEVLRAE
RNAVANKMKGKLDPSVRQALVDEGKNLKESLIVLEENLVQLTDKLQLEAQSIPNTTHPDV
PVGGEENSVVRKEVGSQRNFSFTIKDHVQLGKDLDLFDFDAASEVSGSKFYYLKNEAVLL
EMALVSWAIAEVSKKGFTPLITPEIVRSSVVERCGFQPRAQNTQVYSIDGTDQCLIGTAE
IPVGGIHMNSILPDSDLPIKYVAYSHCFRTEAGAAGAATRGLYRVHQFSKVEMFVLCRPE
ESDKYHEELITIEEDLYASLGLHFKTLDMATGDLGAPAHRKYDIEAWMPGLDKYGEISSA
SNCTDYQSRRLGIRFRPAPLELPPATSAKKGKGGSSGPTQFVHTLNATAVAVPRLIISIL
ENFQQEDSTVVIPEPLRPFMGGLGVLSPKTK
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgctgacctgcggccggtacctctcctcagccgctgccaccactctttccctttccccg
cataggaacctaacctcctctttcctccgccgtcaccctctccgcttcctcacctccgcc
gccgccgccaccgcagtccaacccgataccagaggcggcggtggcggcggtggcgcgggt
ggtggtgccacgacgcccaagtggaaggcggcgatagacttcaagtggatccgggacaac
agggatgccgtcgccaccaacattctgaaccggaactccgtcgccaacctagatgtcgtc
ctccagctctacgaccagtacctcgccctgcagaaggaggtcgaagtgctccgagctgaa
agaaatgctgttgctaacaaaatgaaagggaaacttgacccatctgtgcgacaagccctt
gttgacgaaggcaagaacctgaaagaaagccttattgtgctggaagagaatcttgttcag
ctaactgataagcttcagttagaagcacaaagtattcctaataccacacatccagatgtt
cccgtagggggcgaagaaaactctgtcgtcagaaaggaggtaggcagtcagaggaatttc
agtttcaccatcaaagatcacgttcagctgggaaaagaccttgatttatttgattttgat
gcagcttctgaggtcagtggttcaaagttctactacttgaagaatgaagctgttctgttg
gaaatggcccttgtaagttgggctattgccgaggtctcaaagaaaggttttacaccactc
ataactccagagattgtaagatcatctgttgttgagagatgcggtttccagccaagggcc
caaaatacccaggtctattcaatagatggcactgatcagtgcctcataggcactgcagaa
attcctgtcggaggcatccatatgaactctatacttcctgactctgatttacctataaaa
tatgtggcctattcacactgttttcgcacagaagctggtgctgcaggtgctgccaccagg
ggcctataccgagtacatcaatttagcaaggttgagatgtttgtattatgtcggccagag
gaaagtgacaagtaccatgaagaacttattaccattgaagaggatctttatgcatcactc
ggacttcatttcaaaactttggatatggccacaggggatttgggcgcaccggcccacaga
aagtatgacatcgaggcatggatgccaggtctagataagtatggtgagatctcaagtgct
tcaaactgcacggattaccagagcaggcggctgggcatccgtttccgtccagcacccttg
gagcttccaccggcgacaagcgctaagaaaggaaagggtggcagttcaggcccaacacag
tttgtgcacacactcaatgcgacggcagtggctgttcctcgactgatcatatctattctg
gagaattttcagcaagaggatagcactgtggtgattccggaaccgctgaggcccttcatg
ggtgggcttggcgttctctcccccaaaacaaagtga
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