Lolium perenne (perennial ryegrass): 127295337
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Entry
127295337 CDS
T08650
Name
(RefSeq) oligouridylate-binding protein 1B
KO
K13201
nucleolysin TIA-1/TIAR
Organism
lper
Lolium perenne (perennial ryegrass)
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lper03019
]
127295337
03041 Spliceosome [BR:
lper03041
]
127295337
Messenger RNA biogenesis [BR:
lper03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
127295337
Spliceosome [BR:
lper03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
127295337
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
ATG1-like_MIT2
Motif
Other DBs
NCBI-GeneID:
127295337
NCBI-ProteinID:
XP_051181231
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Position
4:191553712..191560482
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AA seq
443 aa
AA seq
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MQQLMKQAVAAQQQQQQMMQQALLMQHHQQHQQAAAGPPMFPAHHPHPGLVAAQQIEPIV
SGNLPPGFDSSTCRSVYVGNISLQVTDSLLHEVFQSIGPVEGCKLIRKEKSSFGFVDYYD
RRYAALAIVSLNGRQLVGQPIKVNWAYTSTQREDTSGHFNIFVGDLCPEVTDAALFAFFS
AYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINELNGKWLGNRQIRCNWATKGAN
AGEEKQSTDSKGMVELINGPSEAGKENANEDGPENNPHYTTVYVGNLPHDINSNDVHRFF
HLLGAGSIEEVRVTRDKGFGFVRYSTHEEAAVAIQTGNGQLIGGRQIKCSWGSKPTPPGT
ASAPLPPPALTPYTPGVSAADLFYERSLALSKMAANPGLMGQHASLRQAAMGMGAGASQA
IYDGGFQSVNPQQQQQQQQLMYY
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagctgatgaagcaggcggtggcggcgcagcagcagcagcaacagatgatgcag
caggcgctcctcatgcagcaccaccagcagcaccagcaggcggccgccggcccgcccatg
ttcccggcgcaccacccgcacccgggtctcgtcgccgcgcagcagatagagcccattgtt
agtggaaaccttccacctggctttgattcaagtacatgccgcagcgtgtatgttggcaat
atcagtcttcaagtcacggattcactactccatgaggttttccaaagtattggtccagta
gaagggtgcaagctcatcaggaaagaaaagtcatcttttggttttgttgactattatgac
cgtagatacgctgcgcttgcaatcgtgtcactcaatggtagacagctggttggccagcca
ataaaagtcaattgggcatatacaagtacccagagagaagatacatcaggtcattttaac
atctttgtcggggatctttgcccggaggtcacagatgctgctttgtttgcttttttctcg
gcatattctacctgctcagatgctagggttatgtgggatcagaagactggacggtcccga
gggtttggttttgtttcctttagaaatcagcaggatgcacaaactgccataaatgaattg
aatggaaagtggcttggcaaccgccaaattcgttgtaattgggcaacaaagggcgctaat
gctggtgaggagaagcaaagtacagactccaagggtatggtagagttgataaatggacca
tcagaagctggcaaagagaatgcaaacgaagatggccctgaaaataacccacactatacg
actgtttatgttggcaatcttccccatgatatcaacagcaatgacgtgcatcgatttttt
catttactcggggctggctcaattgaggaggtccgcgtaacacgtgataaaggttttggc
tttgtgaggtatagcacccatgaagaagctgcagtagcaattcagacgggtaatggccaa
cttattggtgggaggcagatcaagtgctcttggggaagcaagccaactccacctgggacg
gcatctgcgcctctgccccctccggcattaacgccatacacccctggcgtgtcggcagct
gacctcttctacgagcgatccctcgcgctgagcaagatggctgctaacccaggtctgatg
ggtcagcacgcttccctgaggcaggctgctatgggtatgggcgccggagccagccaggcc
atctatgatggtggcttccagagcgtcaaccctcagcaacagcaacaacagcagcagctc
atgtactactga
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