Lolium perenne (perennial ryegrass): 127295378
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Entry
127295378 CDS
T08650
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127295378
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lper03019
]
127295378
Messenger RNA biogenesis [BR:
lper03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
127295378
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
127295378
NCBI-ProteinID:
XP_051181280
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All DBs
Position
4:complement(188314662..188319057)
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AA seq
463 aa
AA seq
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MEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFSDAAVA
ERVIMEKHMIDGRMVEAKKAVPRDDQQALSKSGGSAHGSPGPSRTKKIFVGGLASTVTES
DFRTYFESFGSITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKR
AVPKELSPGPSMRSPAGGINYVMNRTNSFLNGYTQGYNPSPVGGYGVRMDARFGLLSGGR
SSYPSFGGGYGVGMNFDPGMNPGIGGSSNFNNSVQYGRQINPYYSGNSGRYNSNISYGGV
GENSGSVFNSLARNLWGNSGLNYSSNSANSSSFMSSANGGLGGIGNNNVNWGTPPVLSQG
GNAGSGYGSGNFGYGSSENNFNLSPSAYGRNAGSGGVNASLNQSSNGYGRNFGDSSAGGG
ASIYGDTTWRSGSELDGTSPFGYGLGNAASDVTAKSSAGYMGH
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggacgccgggaagctgttcatcggtggcatctcgtgggacaccaacgaggac
cgcctcagggagtactttgagaagtatggagaggtggtggaggccgtcatcatgcgcgac
cgggcaactggccgtgcccggggcttcggcttcatcgtgttctccgacgcagcagtcgca
gagcgtgtcataatggagaagcatatgatcgatggccgcatggtggaggccaagaaagct
gttccgagggacgatcagcaagctcttagcaagagtggtggcagtgctcacggatcacca
gggcctagtcgcaccaagaagatattcgtcgggggtcttgcatccaccgtcacagagtca
gacttcaggacatattttgagtcgtttggctcgatcactgatgttgtcgtgatgtatgat
cacaacacgcagcgtcctagaggatttgggttcataacatatgattctgaagacgctgtg
gacaaggcattgttcaagacgttccatgaactcaatggtaagatggttgaggtaaagagg
gctgttcctaaggagctatctccgggacctagcatgcgctcgcctgctggtggaatcaac
tatgtaatgaacagaaccaatagctttcttaatgggtatacccaaggttacaatccgagc
ccggtaggtggctatggagtgaggatggatgctaggtttgggcttctatcgggtggccgt
agtagctatccttcttttggtggtggttatggagttggtatgaattttgacccagggatg
aacccgggcattggtggtagctcgaacttcaacaatagtgtccagtatggacggcagatc
aatccatactacagtggtaattcgggtagatacaatagcaacattagctatggtggagtc
ggtgagaattctgggtcagtgtttaactcgctggctcgtaatctatggggtaactcaggt
ctcaattactcttcaaactccgcaaattctagttcattcatgtcatctgcaaatgggggc
cttggcggaattgggaacaacaatgtgaactggggaacccctcctgtgctttctcaaggt
ggtaacgctggctcaggctacggcagtgggaactttggttatggatccagtgaaaacaac
ttcaatctgagtcccagtgcttatggaaggaacgctggatcaggtggcgtcaatgcttcc
ctcaaccaatcaagcaatggatatgggaggaactttggagattcttcagcaggtggtggt
gcctccatctatggtgacacaacctggagatctggatctgagcttgatggaaccagtcca
tttggatatgggcttgggaatgcagcttcagatgttacagcaaagagctcagcaggttac
atggggcattaa
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