Lolium perenne (perennial ryegrass): 127295414
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Entry
127295414 CDS
T08650
Name
(RefSeq) nuclear pore complex protein NUP107 isoform X1
KO
K14301
nuclear pore complex protein Nup107
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127295414
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lper03019
]
127295414
03036 Chromosome and associated proteins [BR:
lper03036
]
127295414
Messenger RNA biogenesis [BR:
lper03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127295414
Chromosome and associated proteins [BR:
lper03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
127295414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
Motif
Other DBs
NCBI-GeneID:
127295414
NCBI-ProteinID:
XP_051181315
LinkDB
All DBs
Position
4:complement(186335235..186348290)
Genome browser
AA seq
1093 aa
AA seq
DB search
MDVDQSSSPRRPPSSTPGYLDPESSRLREEYRRYRKRLSSSNDSPLLGTSVSRFSEARVL
HDGSSMPRRPNAGLLLEEIKQEAADYSDIDGFDGSKLFGSAKRRTSLDGGSAPDAGFVSG
RKPVRSSMNPVKMEGDMLQQGETTFTVFASLLDSAIQGLMPFPDVILQFERTCRNASESI
RYAATGKLRMAEDKLMQQKAQLLLDEAASWSLLWYLYGKANEELPGELFVSPTTSHQEAC
RYVATDLTAQLCLRIVLWLEGLASEALDLEKKVRGSHVGSYLPSSGVWHRTQRYLKRKNN
DSNIVKHVDFDAPTREGAQLLPDDKKQDELLLEDIWTLLRAGRLEEACELCRSAGQAWRA
ATLCPFGGVDMFPSLEAMLSNGQARTLQAIELESGIGRQWRLWKWASYCASEKIAEHDGG
RYEMAVYAIQCSNLKRTLPICTDWESACWAMAKSWLDVQVDLELSQYHTSRQEEKQYDDD
MNGTQPMLSSVGPENWPYLVLDQQPRDITALLQKLHSSDLVHETVSRACREQHRQIEMNL
MSGNVAHLLDLLWSWISPSEEDQNVSSPLRSRDDPEMIRFGAHIVLVMRYLFSEEMEDEL
EEKLVTVGDLIINMYVRYLFSEQQEELVGVYASQLERDVCIDLFVEMMELRLNSSLHTMY
KLFLSAVEYLPFSSGDVSKACFEEIIERVLSRSRETKPNKYNEDFSDVAERHHVQALHKA
MVIQWLCFTPPSSIPGFQMITGKLLMRALMHSNTLFREFSLISMRRGSELPIGPHKLLAI
LAEPLKQKENFSLEDQEISDNLQEFEDWHEYYSLDATYRGWLRCEMENSSVPPDMLSAEE
KDQAVAAATQTLELAFLLLLREERPWLNAVEISPFESSELVFLELHATAILCLPSGECMP
PDATSCTALTSALYSTVSEEEVLHRQLKVDVKVSSKDPCCIEVALRCLATEGDGFGLHEA
NDGGLLAAIMAAGFKGELNRFQPGVSMEISRLDAWYSDGHGSVESTAAYIIRGLCRRCCL
PETILRSMQASISLSEAGDSLDHCDKLIELVASSDSGMIHLFSQQQIQEFLIFERECFIC
KMELEEEQIPTDG
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggaccagtcgtcgtccccgcggcggccgccgtcgtcgacgccgggctacttg
gacccggagtcctcccgcctccgggaggagtaccgccgctacagaaagagactatcttct
tcaaatgactccccgctgttggggacctcagtctccagattctcagaagcaagggtgttg
catgatggtagcagcatgcctaggcggcccaacgctggtctactccttgaggaaatcaag
caggaggctgctgattattctgacattgacggtttcgatggatcaaaactctttggatca
gcgaaaagaaggacatcgttggatggcggttctgcaccagatgcaggcttcgtttctggt
agaaagccggtgaggtcgtctatgaatccggtcaagatggagggcgatatgctacaacaa
ggagaaacaacttttacagtgtttgcatcccttcttgattctgcgatacaaggattgatg
cccttcccagatgtgattttacagtttgagaggacatgcagaaacgcttcagagtcgata
aggtatgctgccacaggaaagcttcggatggcagaagataaacttatgcagcaaaaagca
caactgttactggatgaagctgcttcttggtcacttctttggtatctctatgggaaagca
aatgaggagcttcctggagagctatttgtgtcaccaactacatcccatcaggaggcttgc
cggtatgttgcaacagatctcacagcacaattgtgtcttcggattgtgctttggcttgaa
ggacttgcttcggaagctcttgatttggagaaaaaggtgagaggatctcatgttggttca
tatctaccaagttctggtgtttggcatcgtacgcagaggtacttaaaaagaaagaacaac
gattctaatatagtgaagcatgtggattttgatgctccaactcgtgaaggagcccaactt
cttcctgatgacaagaagcaagatgaattgcttttagaagatatctggactctcttgagg
gctgggagattagaagaggcatgtgaattgtgccggtctgctggacaggcatggagagct
gccactctttgcccctttggtggcgtagatatgtttccttccctggaggccatgctcagc
aatggacaggctagaacattacaagccattgaattggaaagtggtattggacgtcagtgg
cgtctttggaaatgggcatcttattgtgcttcagagaaaattgctgaacacgatggtggc
cggtatgagatggctgtatatgctatacagtgtagtaacttgaagcgtaccttgccaatc
tgtactgactgggagtcagcttgttgggcaatggcaaaatcttggctggatgttcaagtg
gatctggaattatctcaataccataccagcagacaagaagagaaacagtatgatgatgat
atgaatggaacccaacctatgctcagttcagtgggcccagaaaattggccataccttgtt
cttgatcagcaacctcgtgatataactgcacttttgcagaaactccactcaagtgacctt
gtgcatgaaactgtttctcgagcatgtcgggagcagcatcgacaaattgagatgaatctc
atgagtggaaatgtagctcatcttcttgaccttctatggtcatggatatcaccctctgag
gaggatcaaaacgtttcgagcccacttaggtcccgtgatgatcctgagatgatacgtttt
ggggcacatattgttcttgtcatgagatacttattcagcgaggaaatggaagatgagttg
gaggagaagctggttactgttggtgatctcattatcaacatgtatgtgaggtacttattt
tcagagcagcaagaagagttagttggagtgtatgcctctcagcttgaacgtgatgtttgc
atcgatttgtttgtggaaatgatggaactaaggttaaatagcagcttgcataccatgtac
aagcttttcctctctgctgtggaatatctgccattctcgtctggagatgtgtccaaggcc
tgttttgaagagataattgagagagttctttcaagatctcgggaaacgaaacccaacaag
tacaatgaagatttttccgatgttgcggaacggcatcatgtgcaagcacttcacaaggca
atggtcattcagtggctttgctttaccccgccatcctcaattccaggctttcagatgatc
acagggaagcttctgatgcgggcattgatgcatagcaacacactatttagagagttttcc
ctgatatcaatgaggagaggctctgaactaccaataggaccacataaattgcttgccatc
cttgctgaaccattgaaacaaaaggagaacttttcgctggaagatcaagagatatctgat
aacttacaagagtttgaagattggcatgaatattactccctggatgcaacttaccggggt
tggcttagatgtgagatggagaattcttctgttcctcctgacatgctttcagcagaagaa
aaggatcaagctgttgctgcagcgacacaaacactggagctggctttcttgttattactc
agggaggaaagaccatggctaaatgctgtcgagattagtccatttgagtcgtcagagctt
gttttccttgagttgcatgcaactgcaatactctgtctaccgtctggagaatgcatgcca
ccagatgcaacgtcatgcacggctcttacaagcgcactttattcaactgttagcgaagag
gaggtgctgcatcgccagctcaaggttgatgtcaaggtctcgtctaaagatccttgttgt
attgaagtcgcgcttcgctgcttagcaacagaaggtgatgggtttggacttcatgaagcc
aatgatggaggtcttcttgctgcaataatggccgctgggtttaaaggtgaactcaatcgg
tttcagcctggagtttcgatggaaatttcacgacttgatgcttggtattctgatggtcat
ggttcagttgaaagtactgctgcttatatcatccgagggctctgtcggagatgctgtcta
ccagaaactattctacgatccatgcaggcatctatctccctttctgaagcaggcgattct
ctagatcattgtgataaactcattgagttggttgcttcatcagattccggaatgatccat
ttgttcagccagcagcagatacaggagtttctgatctttgagagggagtgcttcatatgt
aaaatggagcttgaggaagagcagatacctactgatggctaa
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