Lolium perenne (perennial ryegrass): 127295444
Help
Entry
127295444 CDS
T08650
Name
(RefSeq) guanine nucleotide exchange factor SPIKE 1
KO
K21852
dedicator of cytokinesis protein 6/7/8
Organism
lper
Lolium perenne (perennial ryegrass)
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lper04131
]
127295444
Membrane trafficking [BR:
lper04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
127295444
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHR-2_Lobe_A
DOCK-C2
DHR-2_Lobe_C
DHR-2_Lobe_B
Motif
Other DBs
NCBI-GeneID:
127295444
NCBI-ProteinID:
XP_051181359
LinkDB
All DBs
Position
4:complement(272342775..272356805)
Genome browser
AA seq
1837 aa
AA seq
DB search
MDSTAAGEGQRFKRIPRQSCARNLELDPLLNENLEQWPHLNELVKCYKADFVKDDCKYGH
YESVAPPSFQNQIFEGPDTDMETELQLCNARHSKPEETTEDDMPSTSGRQTYETELSAST
SKIHCTISPLPAYEPAFDWDNERSLIFGQRVPESLPATHSSGLKITVKVLSLSFQAGLVE
PFSGTVCLYNRDRREKLSEDFYFNILPTEMQDAHISLDRRGVFSLDAPSPSICLLIQLEK
AATDEGGVTPSVYSRKEPVHLTEKEKQKLQVWSRIMPYREPFAWAMIPLFENNHSAGAGD
TASPSSPLAPSMPGSSSQDSIVEPISKFTLDGKINNYSSGTSVIIEIPNLNKVKESYIED
SLQDPKRKVHKPVKGVLRLEVEKLHNDRNDVDTISEGGSMNSELHDAGELNNGRHSRNSV
DGIHSSLNSSTIVKKDTRPNGQNSQAENGDNFQAFDFRMLARSEPFSQLFHCLYVYPLTV
SLSRKRNLFVRVELRNDDSDMSKLPVEAVHPRDHNTALQKCAHTQISVGTRMSCYHDEVK
ISLPALLTPQHHLLFTFFHVDLQMKLEAPKPVIVGYAALPLSTHIQLLSDISLPILRELV
PHYLQESGKERMNYLEDGKTVFRLRLRLCSSLFPVNERIRDFFVEYDRHTLHTSPPWGSE
LLEAINSLKNVEYTALLHFLQPILNMLLHLIGDGGETLQVAAFRAMVNILTRVQQESSDG
AERNRFLVNYVDFAFDDFGDRQTHVYPGLSTVWGSLARSKAKGYRVGPVYDDVLAMAWFF
LELIVKSMGLEQSRLFYHNLPLGEDVPPLQLKEGVFRCIMQLFDCLLTEVHERCKKGLNL
AKRLNSTLAFFCYDLLSIIEPRQVFELVSLYMDKFAGVCQSVLHDCKLTFLQIICDHDLF
VEMPGRDPSDRNYLSSVLIQEIFLTLDHDDLSQRAKAARILVVLICKHEFDARYQKSEDK
LYIAQLYFPLIGQILDEMPVFYNLNVIEKREVLVVILQIIRNLDDTTLVKAWQQSIARTR
LFFKLLEECITHFEHNRAGDSLLVGSSSRSSDAERPASPKYSDRLSPSVNTYLSEASRHE
IRPQGTPENGFMWNRISPELGSPNQPYSLREALAQAQSSRIGATTRALRESLHPILRQKL
ELWEENLSSAVSLEVLGIIEKFSVAAASRSISTDYAKLDCVTSILMGLLSRSQPLTFWKA
FLPVLYNIFSLHGATLMSRENDRFLKQIAFHLLRLAVFRNDSVRKRAVLGLQILVRNSFN
YFKSTTRLRVMLTITLSELLSDVQVTQMKSDGSLEESGEARRLRKSLEEMADVRSKDQLI
DCGLPITALEVAAEGSTDNRWSWVEVKHLSKCLVQALDAGLEHALLGSVMTVDRCAAAEG
FYKLALAYAPVPDLHIMWLLHLCDAHQEMQSCAEAAQCAVAVAGVIMQALVGRNDAVWNK
EHVASLCRICPVVGTDVGTEVAAAEVEGYGASKLTVDSAVKYLQLANKLFAQAELYHFCA
SIQELIIPVYKSRRSYGQLAKCHTSLANIYESILEQEASPIPFVDATYYRVGFYGERFGK
LNKKEYVFREPRDVRLGDIMVKLNRTYEAKMDGNQTLHIIPDSRQVNADELQPGVCYLQI
TAVDPVMEDEDLESRRERILSLSTGTVRARVFDRFLFDTPFTKNGKTQGGLEDQWKRRTV
LQTEGSFPALVNRLVVIKSESLEFSPVENAIGMIETRTSALRNELEEPRSSEGDQLPRLQ
SLQRILQGSVAVQVNSGLLSVCTAFLSGEPATRLRSQELQQLIAALLEFMAVCKRAIRVH
FRLIGEEDEEFHTQLVDGFQSLTAELSHYIPAILSEL
NT seq
5514 nt
NT seq
+upstream
nt +downstream
nt
atggattctacggcggcgggggaggggcagcggttcaagcggattccgaggcagtcgtgt
gcgcggaacctggagctggatccactgctcaatgaaaatctggagcagtggccacatcta
aacgagctggtgaagtgttataaggctgatttcgtgaaagatgactgcaaatatggacac
tatgagagtgttgcgccgccgtcctttcagaatcaaatttttgagggacctgataccgac
atggaaacagaattgcagctttgcaacgctaggcattccaagccagaggaaactactgaa
gatgatatgccgagcacctcagggaggcaaacatatgagactgaactatctgcttcaact
tcaaaaattcattgtactatctcacctttaccggcatatgaaccggcatttgattgggac
aatgagagatctctgatattcggccaacgcgtaccagaaagtctccctgcaacacacagc
agtggattgaagataactgtgaaggtattatctttgtcgttccaagctggattagttgaa
ccttttagcggtacagtctgcttgtacaacagagataggagagaaaagctatcagaagac
ttctactttaacatacttccaacagaaatgcaagatgctcatatttctttggaccgtcgg
ggtgttttttcactggatgccccttcaccatcaatctgccttctgatccagctagaaaag
gctgctactgatgaagggggagtaactccttcagtttattcccgcaaagaacctgtgcac
ttgactgagaaagagaagcagaagctgcaagtttggtctcgaatcatgccatatagagag
ccatttgcatgggcaatgattcctctattcgaaaacaaccattctgctggcgctggtgat
actgcctctcctagcagccctttagcaccaagtatgccaggctcaagctctcaagatagc
attgtggagcctatttccaaattcacgttagatggaaaaatcaacaattattcaagtgga
acttcagttatcatagagataccgaacttaaacaaagtgaaggaaagctacatagaggac
tccctccaagatccgaaacggaaagtacacaaaccagtgaaaggtgtactgaggctagaa
gtggaaaaactccataatgaccgcaatgacgtggataccatttctgaaggtgggagcatg
aacagtgaattgcatgatgctggcgagctcaataatggcagacacagcaggaatagcgtt
gatgggatccatagttctctgaattctagtaccattgtcaagaaagatacacgcccgaat
ggtcaaaattcgcaggcagagaatggcgacaattttcaagcgttcgactttcggatgctg
gcccggagtgaaccattttcacaactcttccactgcctctatgtgtacccattgactgtt
agcttgagccgcaaaagaaatctatttgtaagagtagaattgagaaacgatgattctgac
atgagcaaacttccagtagaggctgttcatccaagggatcataatacagcactacagaag
tgtgcccatacccaaatttctgttggcacaagaatgtcttgctaccatgatgaagtcaag
atcagtctgcctgctctattaacgccccaacatcatcttctgttcacatttttccatgta
gatctccaaatgaaacttgaagcccctaaaccagtgattgtgggatacgctgcacttcca
ttgtcaacacacattcagttactttcggacatatctttgccaattttgcgagagcttgtt
ccgcattacctgcaggaaagtggaaaggaaagaatgaactacctggaggatggaaaaact
gttttcaggctgcggttaagactttgctcttcgttgtttccagttaatgaaaggataaga
gactttttcgtcgagtatgaccgtcacacactacatacaagtccaccttggggttctgag
cttcttgaggccataaatagtttaaagaatgttgaatatacggcattgctgcactttctt
caaccaatactcaatatgctgctgcatcttattggcgatggtggtgaaaccctgcaggtt
gctgcatttcgtgccatggttaatattctaacccgggtgcaacaggaatcatctgatggg
gctgagagaaataggtttcttgttaattatgttgattttgctttcgatgacttcggcgat
cggcagacacatgtgtaccctgggctatctactgtttggggtagcctagctcggagtaag
gctaaaggttatagagttggacctgtctatgatgatgtattggcaatggcatggtttttt
ctggagcttattgtaaaatcaatgggactggaacaaagtcgtcttttctaccacaatctt
ccactgggtgaagatgtcccaccactacagttgaaagaaggagtcttcagatgtataatg
cagctatttgattgccttctaactgaggttcatgaacgttgtaaaaagggcttaaacttg
gcaaagcgcttgaacagcactcttgctttcttctgttacgatcttttatcaatcattgag
ccacgccaagtttttgagttggtttcgttgtatatggacaagtttgcaggggtttgccag
tcagtcctccatgattgcaagttgacattcctgcaaataatatgtgatcacgatctgttt
gttgagatgcctggtcgggatccgtctgataggaattatctctcatctgtccttattcaa
gagatctttctcacccttgaccatgatgatttatcacagcgagcgaaagcggctcgtatt
ttggttgtcctaatatgcaagcatgaatttgacgcacgatatcaaaaaagcgaagacaag
ttgtacattgctcagctgtattttcctcttataggacagattctggatgagatgcctgtg
ttctataatctaaatgtcattgaaaagcgtgaagtgctagtagtcattttgcaaatcata
agaaacttggatgacacgactcttgtaaaagcatggcaacagagcattgctagaacccga
ttgttcttcaagctattggaagaatgtataacccattttgagcataacagagcgggagac
agcttgctagtaggctctagttctcggagctctgatgctgagcgccctgcgtcccccaag
tattctgaccggctatccccatcagtcaatacatatttgtcggaggcttcacgccatgaa
ataaggcctcagggaacaccagaaaatggattcatgtggaacaggattagtcctgagcta
ggttccccaaatcaaccatattcattgagagaagcccttgcccaagcacaatcttcaaga
attggagcaacaaccagggcactgagagagtctctgcatccaatactgagacaaaagttg
gaactctgggaagaaaatcttagtagcgctgtgagtcttgaagtgttgggaataattgag
aagttttcggttgcggcagcttctcgcagcatctcgactgactatgctaagctagattgt
gtaacatctatcttaatgggtcttctatctaggagccagcccttaactttttggaaagct
ttccttcctgtgctctataatatatttagtctacatggtgcaacactaatgtcaagggag
aatgaccgcttcttgaagcaaattgcgtttcatctattgcgactggctgtattccgaaat
gattctgtcagaaaaagggccgttcttgggttgcagatccttgttaggaactcattcaac
tatttcaagagcaccacaaggctgagggtcatgctgactattactttgtcagaattgctg
tctgatgtgcaagtaactcagatgaaatctgatggatctcttgaagaaagtggtgaagct
cggcgtcttaggaaatcattagaggaaatggctgatgtaaggagtaaggatcagttgatc
gattgtggccttcctattactgcactggaagtggctgctgaaggttccacagacaatagg
tggtcttgggtagaggtcaagcatctttcaaaatgtctagtccaagcccttgatgctggc
cttgaacatgcccttttggggtctgtaatgactgtggacaggtgtgcagctgctgagggc
ttctacaagttagcattggcctatgcgcctgttccggaccttcacattatgtggttactg
cacctatgtgatgcgcaccaggagatgcaatcatgcgctgaagctgcgcaatgtgcagtt
gctgtagctggtgtgatcatgcaggcccttgttggaaggaacgatgctgtgtggaacaag
gagcatgttgcttctctctgtaggatttgtcctgttgtgggcactgatgtgggcacagaa
gtagctgcagcagaagtcgagggatatggtgcatccaagcttacagtggattcagctgtc
aagtatcttcaacttgcgaacaaactcttcgcgcaagctgaactataccacttttgtgct
agcattcaggaactcatcattccggtgtataaaagcagaagatcttatgggcagttggct
aaatgccacacgtcacttgcgaacatctacgagtcaattcttgaacaggaggctagccct
atcccattcgttgatgctacttactacagagttggattttatggcgaaagatttggcaaa
ctcaacaaaaaggagtatgtgtttagggagccacgggatgttcggcttggtgacattatg
gtgaagcttaatcgtacctatgaggctaagatggatggcaatcaaaccttacatatcatt
cctgactcgagacaagttaatgctgatgagctgcaacctggtgtatgctatctacagata
actgctgttgatcctgtaatggaggacgaggacttggagagcaggagagaaaggattctc
tctttatctactggcactgttcgtgcccgtgtgtttgaccgtttccttttcgacacaccg
ttcacaaagaatggaaaaacacaaggtggcctagaagatcaatggaagaggcgcacagtg
ctccagacagagggttcctttcctgctttggtaaatcgtctggtggtgataaagtctgaa
tctctagagttttcgcctgtcgaaaatgcgattggaatgattgaaacaaggacatctgcg
ttgagaaatgagctagaagaaccgcggagttctgaaggtgatcaattaccaagacttcaa
agcctgcaaaggatactccaaggaagtgtggctgttcaggttaatagtggtctattaagt
gtgtgcactgcattcttatctggcgagcctgcaaccaggctcagatctcaagagctgcaa
cagctcatagccgcattgcttgagttcatggctgtctgcaagcgcgcaatccgtgtgcat
tttaggttgataggggaagaagacgaggagttccacacgcaacttgtcgatgggtttcag
tctcttactgctgagctttctcactatattcctgctatcctttcggagctctga
DBGET
integrated database retrieval system
