KEGG   Lolium perenne (perennial ryegrass): 127295971
Entry
127295971         CDS       T08650                                 
Name
(RefSeq) THO complex subunit 4B
  KO
K12881  THO complex subunit 4
Organism
lper  Lolium perenne (perennial ryegrass)
Pathway
lper03013  Nucleocytoplasmic transport
lper03015  mRNA surveillance pathway
lper03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lper00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    127295971
  09122 Translation
   03013 Nucleocytoplasmic transport
    127295971
   03015 mRNA surveillance pathway
    127295971
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lper03019]
    127295971
   03041 Spliceosome [BR:lper03041]
    127295971
Messenger RNA biogenesis [BR:lper03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     127295971
    TREX complex
     127295971
Spliceosome [BR:lper03041]
 Complex C
  Other components
   EJC/TREX
    127295971
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    127295971
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_3 Btz
Other DBs
NCBI-GeneID: 127295971
NCBI-ProteinID: XP_051181959
LinkDB
Position
4:302827751..302830531
AA seq 269 aa
MAETLDMTLDDIIKNNKKGNPSSGGAGSRRREGRRGSASGGSGAAAAAAGGVGPNRRAFK
RSGNRAAPYQPPKAPESAWQHDKFADVGARGGAGGRVSAIETGTKLFITNLDFGVSSEDI
KELFSELGDLKRCSIHYDRSGRSKGTAEVIFARRGDANAALKKYNNVQLDGKPMKIEILG
TNTPTAPAALPANNGNYARNVSRSAPRSAPAGLPQSRPRARGGRGRRGGGAGGSGSGGRR
GKERNQPRSAEELDADLDNYHASASPMQT
NT seq 810 nt   +upstreamnt  +downstreamnt
atggcggagaccctcgacatgaccctcgacgacatcatcaagaacaacaagaagggcaac
ccctcgtccggaggcgctggcagccgccgccgcgagggccgccgcggctccgcctctggc
ggcagcggcgcagccgcggccgcagccggaggcgtcggcccgaaccggcgcgccttcaag
aggtcggggaacagggcggcgccctaccagccgccgaaggctccggagtcggcgtggcag
cacgacaagttcgcggacgtcggggcgagaggcggcgccggcgggagggtctcggctatc
gagaccggaaccaagctcttcatcaccaatttggacttcggcgtctcgagcgaggacatc
aaggagctgttctctgagctgggtgatctgaagcgatgctcaattcactatgacagaagt
gggaggtctaagggaacagctgaggtaatatttgccaggcgtggagatgctaatgcagcg
ttgaagaaatataacaacgtgcaacttgatggaaagcctatgaagatagagatacttggg
accaacactcctacagctccagctgcacttccagccaataacggaaactatgctaggaat
gtttctaggagcgcaccaaggagtgccccagctggtttgccacagagtagaccccgtgca
aggggtgggaggggtcgtcgtggtggcggtgctggcggcagtggatctggcggtcgtcgt
gggaaagagcgtaatcagccaaggtctgctgaagaacttgatgctgacttggacaactat
catgcaagtgcgtcaccgatgcagacctaa

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