Lolium perenne (perennial ryegrass): 127295971
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Entry
127295971 CDS
T08650
Name
(RefSeq) THO complex subunit 4B
KO
K12881
THO complex subunit 4
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03013
Nucleocytoplasmic transport
lper03015
mRNA surveillance pathway
lper03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127295971
09122 Translation
03013 Nucleocytoplasmic transport
127295971
03015 mRNA surveillance pathway
127295971
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lper03019
]
127295971
03041 Spliceosome [BR:
lper03041
]
127295971
Messenger RNA biogenesis [BR:
lper03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
127295971
TREX complex
127295971
Spliceosome [BR:
lper03041
]
Complex C
Other components
EJC/TREX
127295971
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
127295971
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_3
Btz
Motif
Other DBs
NCBI-GeneID:
127295971
NCBI-ProteinID:
XP_051181959
LinkDB
All DBs
Position
4:302827751..302830531
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AA seq
269 aa
AA seq
DB search
MAETLDMTLDDIIKNNKKGNPSSGGAGSRRREGRRGSASGGSGAAAAAAGGVGPNRRAFK
RSGNRAAPYQPPKAPESAWQHDKFADVGARGGAGGRVSAIETGTKLFITNLDFGVSSEDI
KELFSELGDLKRCSIHYDRSGRSKGTAEVIFARRGDANAALKKYNNVQLDGKPMKIEILG
TNTPTAPAALPANNGNYARNVSRSAPRSAPAGLPQSRPRARGGRGRRGGGAGGSGSGGRR
GKERNQPRSAEELDADLDNYHASASPMQT
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaccctcgacatgaccctcgacgacatcatcaagaacaacaagaagggcaac
ccctcgtccggaggcgctggcagccgccgccgcgagggccgccgcggctccgcctctggc
ggcagcggcgcagccgcggccgcagccggaggcgtcggcccgaaccggcgcgccttcaag
aggtcggggaacagggcggcgccctaccagccgccgaaggctccggagtcggcgtggcag
cacgacaagttcgcggacgtcggggcgagaggcggcgccggcgggagggtctcggctatc
gagaccggaaccaagctcttcatcaccaatttggacttcggcgtctcgagcgaggacatc
aaggagctgttctctgagctgggtgatctgaagcgatgctcaattcactatgacagaagt
gggaggtctaagggaacagctgaggtaatatttgccaggcgtggagatgctaatgcagcg
ttgaagaaatataacaacgtgcaacttgatggaaagcctatgaagatagagatacttggg
accaacactcctacagctccagctgcacttccagccaataacggaaactatgctaggaat
gtttctaggagcgcaccaaggagtgccccagctggtttgccacagagtagaccccgtgca
aggggtgggaggggtcgtcgtggtggcggtgctggcggcagtggatctggcggtcgtcgt
gggaaagagcgtaatcagccaaggtctgctgaagaacttgatgctgacttggacaactat
catgcaagtgcgtcaccgatgcagacctaa
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integrated database retrieval system