Lolium perenne (perennial ryegrass): 127296039
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Entry
127296039 CDS
T08650
Name
(RefSeq) uncharacterized protein
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03013
Nucleocytoplasmic transport
lper03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127296039
03015 mRNA surveillance pathway
127296039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lper03019
]
127296039
03041 Spliceosome [BR:
lper03041
]
127296039
Messenger RNA biogenesis [BR:
lper03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
127296039
Spliceosome [BR:
lper03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
127296039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
127296039
NCBI-ProteinID:
XP_051182023
LinkDB
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Position
4:307365572..307373046
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AA seq
824 aa
AA seq
DB search
MSGGFFRGTSADQDTRFSNKHAKLLKTQKFASELDHHVDMSKVKMDVMKPWIATRVTELL
GFEDEVLINFIYGLLDVKEVDGKHIQIQLTGFMEKNTIKFMKELWSLLLSAQQNASGVPQ
QFLDAKEAEIQQRKAEEARIAQEIQKKREKDGRDTELDKRKMIDGGTGNSRFQGDSLGSA
LNNPDANAEKERELDLKHSSRTKSREHRRPRSTSLSPRGRQRSISPRRRSPSPSRQRSSR
RSVSPRRSVSPRRHSPRIAPSVSRRRSPYSRRSPSVPRSPSPRRRFPIRRRSPPSGRRRT
PSPYRRRSPPRPPRRSPSPSRRRSPARRRLPADRHWSPSPARRRPRSPSPGRRRLRSPSP
RRNRPESPGRGQSPSPHRSPQLRSPKRVRKSPISSRALSANRQVSPQRRRSISPYSRSPN
RSRRSLSRDTENGTNGMPSTKDRDVAQRNRGRKSYVDGSNDREMSGHRSPGSEQRRLTNS
LRSPTNAERVSTRDSPLKSTGKHLPSQDSTDSSGDEKELSRARENARKANSSRLKSKDFD
LQLKEVDVDKSSPREKSPSRLQKDGGKDIPRKYDNELSDSSEDARDSRRTRRQSDSPDDS
RVKQQSPAIDKISNEHAKAASHNANVAKKYSGKVGEASLSDVGSPVQKAKKRTYGSNHID
HHSSGSEESEKDRSHSEKHRHKKGHKHKRHHDDSSESNSDSDGKESKRRRREEKKLRKEE
RRLRREERHRRRADRHASKQKLKYLGTSPSDLEKDLSGSDADVKKKGSYTPREEPDPNKL
EVELRQRALESFSAKKSKHVVTPSSDVDKDTESNSDDDVRKKLL
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggaggcttcttccgggggacgtcggcggaccaggacacccgtttctccaacaag
catgccaagctgctcaagacgcagaagtttgcgtccgagcttgaccaccatgtggacatg
tcgaaggtgaagatggacgtgatgaagccgtggatcgcgacaagggtcaccgagcttctt
gggttcgaggacgaagtgcttatcaacttcatctacggcctgctcgacgtgaaggaggtg
gacgggaagcacatacagatccagttgacagggttcatggagaagaatacaattaagttc
atgaaggagctgtggagcctcctccttagtgcacagcagaatgccagtggtgtgccccag
caatttttggatgctaaagaggccgagattcagcagagaaaggcggaagaggctagaatt
gcccaggaaatccagaagaaacgagagaaagatggaagggacacagaactggataaacgc
aaaatgattgacgggggtaccggtaattcaagatttcaaggtgattcacttggctctgct
ttaaataatcctgatgccaatgctgagaaagagagggaattggacttgaagcatagctca
agaacaaagagccgggaacatcgcagacctaggagcacatctttgtcacctcgtggtagg
cagcgatctatttctccgagaaggcgttctccatccccttccaggcaaagatcatcacga
cgttcagtttcacctagacgttctgtttctccccgaaggcattctcctagaattgctcct
tcagtatctaggcggagatcaccctattccaggagatctccttcagtaccgagatcccca
tcgcctcggcggagatttcctattaggaggagatctccaccttcagggcggcgtagaaca
ccatctccctatcgccgccggtctccacctcgtccacctaggagatcaccatctccttct
cgccggaggtcacctgctcgacgcagattaccagctgacagacactggtccccgtctccg
gcaagacgcaggccacgatccccttcacctggaagacgcaggctacgatctccatctcct
agaagaaataggccagagtctccaggaagagggcagtcaccatcacctcatcgctcaccc
caattgaggtcaccaaaacgcgtgagaaaatccccaatttcgagtagagcactttctgca
aatcgtcaagtttctccccagcggagaaggagtatcagtccatacagcaggagtccaaat
cgttcccgtaggagtctgagtagagacactgaaaatggaacaaatggtatgccttccact
aaagatagggatgtggctcaaaggaaccgaggaagaaaatcatatgtcgatggcagcaat
gatagagaaatgagtggtcatcgttcaccaggctctgaacaacgtaggctcacaaattcc
ttgaggtctcctacgaatgcagaaagagtctccacacgtgacagtcctttgaagagcact
gggaaacatttacccagtcaggacagcacagatagcagtggggatgagaaagaattgagt
cgtgcaagagaaaatgcacggaaggccaattcatcacgcttgaaatctaaggattttgac
ctgcaactaaaggaagtggatgttgataagtcaagccctagagaaaaatccccatctaga
ttacaaaaggatggcggcaaagatatccccaggaaatatgacaatgaattatcagattca
tcagaagatgcacgtgatagtagaagaacgagacgccagagtgattctcctgatgattct
cgtgtgaaacagcagtcccctgcaattgataaaattagcaatgagcatgccaaggcagct
tcacataatgctaatgtagcaaagaaatattctggtaaagttggcgaagcttcactatca
gatgttggaagtcctgttcaaaaagctaagaaaagaacatatgggagtaatcacattgat
catcacagttcaggctcagaagaatctgagaaagacagatctcattctgagaaacatagg
cataagaagggtcacaagcataaaaggcatcacgatgacagttctgagtctaattctgac
tcagatgggaaggagtccaagaggaggaggagagaagagaaaaagctgcgaaaagaggaa
aggcgccttaggcgtgaagaacggcaccgcagaagggcagaccgtcatgccagtaaacaa
aaattgaagtatcttggtacttcaccttcagatcttgagaaggatctatctggctcagat
gctgatgttaagaagaaaggttcatacactcccagagaagaacctgatccgaacaaactt
gaagttgagcttcgtcagagggctcttgaatcgtttagtgcaaagaaatcaaagcatgtt
gttactccgtcttcagatgttgataaggatactgaatctaactcagatgatgatgttagg
aagaaacttttgtag
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