Lolium perenne (perennial ryegrass): 127296499
Help
Entry
127296499 CDS
T08650
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit B
KO
K07466
replication factor A1
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03030
DNA replication
lper03420
Nucleotide excision repair
lper03430
Mismatch repair
lper03440
Homologous recombination
lper03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
127296499
03420 Nucleotide excision repair
127296499
03430 Mismatch repair
127296499
03440 Homologous recombination
127296499
03460 Fanconi anemia pathway
127296499
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lper03000
]
127296499
03032 DNA replication proteins [BR:
lper03032
]
127296499
03400 DNA repair and recombination proteins [BR:
lper03400
]
127296499
Transcription factors [BR:
lper03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
127296499
DNA replication proteins [BR:
lper03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
127296499
DNA repair and recombination proteins [BR:
lper03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
127296499
MMR (mismatch excision repair)
127296499
DSBR (double strand breaks repair)
HR (homologous recombination)
127296499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
DUF5651
Motif
Other DBs
NCBI-GeneID:
127296499
NCBI-ProteinID:
XP_051182560
LinkDB
All DBs
Position
4:complement(333085429..333088859)
Genome browser
AA seq
612 aa
AA seq
DB search
MDAAAAAMPVTPGAVAYVIANPAPATPDDVRETVVQVVDLKPIGSRFSFMASDGKDKIKA
ILSTHFASEVHSGRLQNLGLLRILNYACNDVPNKQDKILIITKCEVVSPALDAEIKCEVK
VEEEPAVLSKPASIVLKPRQDVKSASQIVSEQRGNAAPAARLAMTRRVHPLLSLNPYQGN
WVIKVRVTSKGNLRSYRNARGEGHVFNVELTDEDGTQIQATMFNEAAKKFYPVFELGKVY
YISKGSLRIANKQFKTVQNDYEMTLNESAVVEEAEGETFIPPVQYNFVKIDMLGPYVGGR
ELVDIIGVLQSVSPTLSIRRKIDNESIPKRDIVVADDSNKTVTVTLWNDLATTVGEELLD
MVDSAPIIAVKSLKVSDFQGVSVSTVGKSTLVINPELPEAEKLKAWYESEGKGTSMTSVG
AGMGASSPGSSRSLYSDRVFLSHITSDPDLGQGKPVFFSLHAHISHIKPDQTMWYRACNT
CNKKVTEQIGSGYWCEGCQKNYDECALRYIMVIKVSDPTGEAWLSLFNDQAERIIGCSAD
ELDRIRKEEGDDRFQLKLKEATWVPHLFRVSVAQNEYMGEKRQRITVRSESPVDFAAEAK
YQLEEISKLTAC
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgccgccgccgctatgccggtgacaccgggcgccgtggcctacgtcatagcc
aacccggcgccggccacgcccgacgacgtgcgggagaccgtcgtgcaggtcgtcgacctc
aagcccatcggctcccgcttcagtttcatggcgagcgacgggaaggacaagatcaaggcg
attctctccacccacttcgcctccgaggtccactccggcagactccagaacctcggcctc
cttcgcatcctcaactacgcctgcaacgacgtccctaacaagcaggacaagatcttgatc
atcaccaagtgtgaggtcgtgtccccggcgttagatgccgagatcaagtgcgaggtcaag
gtagaagaggagcccgcggttctgtctaagcctgcctcgattgtgttgaagccgaggcag
gacgtgaaatccgcctcccagattgttagcgagcagcgtggaaatgctgcccctgcagcg
cgcttggccatgaccagacgggtgcatccgttgctctctctgaacccctaccagggtaac
tgggtcatcaaggttcgggtcaccagcaaaggcaacctgagatcttacaggaatgcccgt
ggggaaggccacgtcttcaatgtagagctcactgacgaggatggcacccagatccaggct
acaatgttcaatgaggctgcaaaaaagttctatccagtgtttgagctggggaaggtctac
tacatctccaaaggatcactccgaattgccaacaagcagttcaagacagtccagaatgac
tacgagatgacccttaatgagagtgctgttgttgaagaggctgagggggaaactttcatt
ccaccagtgcaatacaactttgtcaagattgatatgctagggccatatgttggtggcagg
gagctagtagatatcattggcgttcttcagagcgtgtcacctactctgagtatcagaaga
aagattgacaatgagtccatcccaaagcgtgacattgttgttgcagatgactcgaacaaa
actgttactgttactctttggaatgatcttgccaccactgttggtgaagagctcttggac
atggttgactctgcacctatcattgcagtaaagagcctgaaagtatctgactttcaaggt
gtatctgtctccactgtgggcaagagtactcttgtaattaaccctgagttgcctgaggca
gaaaagcttaaagcctggtatgagtctgaaggcaagggcacttccatgacatcagttggt
gcaggcatgggtgcatctagtcctggtagctctagatcattgtactctgacagagttttc
ctgtctcacatcacaagtgatcctgatttgggtcagggcaagcctgttttcttcagcctg
catgcccatataagccacatcaagcctgaccagaccatgtggtaccgtgcctgtaacacc
tgcaacaagaaggtgactgaacaaattggatcaggctactggtgcgaaggttgccagaag
aactatgatgagtgcgcactgaggtacatcatggtcatcaaggtctctgatcccactggt
gaggcctggctttctctcttcaatgaccaagcagagaggatcatcggctgcagtgctgat
gagcttgatcggatcaggaaagaggagggtgatgacaggttccagctcaagctgaaagag
gctacctgggttccccacctcttccgcgtgagcgtggcacagaacgagtacatgggtgag
aagaggcagaggatcactgtgaggagtgagtcgccggttgactttgctgctgaagcaaag
taccagcttgaggagatctccaagctcactgcctgctag
DBGET
integrated database retrieval system
