Lolium perenne (perennial ryegrass): 127296509
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Entry
127296509 CDS
T08650
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
lper
Lolium perenne (perennial ryegrass)
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lper03400
]
127296509
Enzymes [BR:
lper01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
127296509
DNA repair and recombination proteins [BR:
lper03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
127296509
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
DExH14_plug
ResIII
Helicase_C
AAA_22
AAA_30
T2SSE
AAA_19
DEXQc_Suv3
PhoH
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
127296509
NCBI-ProteinID:
XP_051182571
LinkDB
All DBs
Position
4:333928601..333949036
Genome browser
AA seq
2071 aa
AA seq
DB search
MLAPLPRLTSSLRAHFDADQAYLARKAVLQARTLPRPHDEWELARRIVPNWDDAPSDVRQ
AYKQFIGAVVELLNGEAVSEELQQVAQAVYRLFAAESDSTDKPPLQKRNELERLVGYSVQ
DSVSKKLAQLAQKLRSLQRVNIQGFVQEDAKGVDGDDVTEFGASFDFKAPARFVIDVDLD
DDLSFEKEQHDACGTSTSFSSNAVGGSVNLRWLKDQCDLITTSGGSMLSGDELAMALCRV
LRSNKPGDEIAGELLDMVGDAAFEIVQDLLSHRKELGDAIQHGLTILKSEKVSSNNQPKM
PTYGTQVTVQTESERQLDKIKRKEGRRGKRGAENGMGDFGVDDFSSLLLASERKLPFEDM
IGTGEGESSFQVTSLPQGTTRKHMKGYEEVKIPPTPTAPLKPNEKLIKIRELDDIAQAAF
QGYESLNRVQSRIFQATYNTNENILVCAPTGAGKTNIAMIAVLHEVKQHFREGILHKNEF
KIVYVAPMKALAAEVTATFGRRLSPLNLVVRELTGDMQLTKNEIEETQMIVTTPEKWDVI
TRKSSDMALSMLVKLIIIDEVHLLNDDRGSVIETLVARTLRQVESMQSMIRIVGLSATLP
TYLEVAQFLRVNADTGLFNFDSSYRPVPLAQQYIGITERDYAKRNELFNSLCYEKVVESI
KQGYQALVFVHTRKDTGKTARTMIDLAAKAGEVELFSNADHPQYSLIKKDVSKAKSREVV
EFFESGFGIHNAGMMRSDRSLMERLFADGLLKVLVCTATLAWGVNLPAHTVVIKGTQLYD
AKAGGWKDLGMLDVMQIFGRAGRPQFDKSGEGIIITTHDKLAYYLRLLTSQLPIESQFLG
SLKDNLNAEVALGTVTNVREACAWLGYTYLFIRMKTNPLVYGITWEEVIGDPSMGAKQRA
FIIDAARALDKAKMMRYDEKSGNFYCTELGRIASHFYLQYSSVETYNEMLRRHMSESEVI
NMVAHSSEFENIVVREEEQDELEILARKACPLEIKGGPTDKHGKISILIQVYISRASVDS
SSLHSDAQYISQSLARIMRALFEICLRRGWSEMTSLLLEYCKAVDRKIWPHLHPLRQFDR
DLSPEILWKLEERNVDLDRLYEMEENDIGALIRFSHQGRLVKQYLGYFPYVNLSACVSPI
TRTVLKVDLLITPEFVWKDRHHGMSQRWLIIVEDSENDTIYHSELFTLTKKMARGIPTKI
SFNIPIFEPHPPQYYIRAVSDSWLHAESLFTVSFHNLTLPQTQITHTELLDLKPLPLSAL
GNKAYEDLYRFTHFNPIQTQAFHVLYHTDTNVLLGAPTGSGKTISAELAMLHLFNTQPDM
KVVYIAPMKAIVRERMNDWRKRLVTQLGKKMVEMTGDFTPDMMALLSADIIISTPEKWDG
ISRSWHSRGYVMKVGLMILDEIHLLGADRGPILEVIVSRMRYISSQTERSIRFVGLSTAL
ANARDLADWLGVREDGLFNFKPSVRPVPLEVHIQGYPGKFYCPRMNSMNKPAYAAICTHS
PDKPVLIFVSSRRQTRLTALDLIQLAASDEKPRQFLSIADNSLDMILSQVTDNNLRHTLQ
FGIGLHHAGLNDRDRSLVEELFSNNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGKTK
RYVDYVITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPFPVESNLREHLHD
HINAEIVSSTIGNKEEAIIYLTWTYLYRRLVVNPSYYGLEDTETFTLNSYLSRLVETTFE
DLEDSGCIKVDDHSVQSLILGKIASQYYLSYLTVSMFGSNIGPNTSLEAFVHILSAAAEF
DELPVRHNEDNLNRALCEKVPYSVDQHRLDDPHVKANLLFQAHFSRAELPMSDYITDLKS
ILDQSIRIIQAMIDVCANSGWLSSALTCMHLLQMIIQGLWFERDSSLWMLPSMNDNLLDH
LKGRGVSTVLNLLDRSGEELRKLLQPFAAPELSQDLQHFPRLDVNVKLQNEVKGQSKPPM
LNIRMQIKNSRRSSRAFSPKFPKVKQEAWWLVLGNVTSSELYGLKRISFADRVLNTRMKL
PQTFNAQETKLIVVSDCYLGFDQEVSLGHLA
NT seq
6216 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcgccgctcccccgcctgacaagctcgctccgcgcccacttcgacgccgaccag
gcctacctcgcccgcaaggccgtcctccaagcccgcaccctccccaggccgcatgacgag
tgggagctcgcccggaggatcgtgcccaactgggacgacgctcccagcgacgtgcgccag
gcgtacaagcaattcatcggcgcagtggtggagctgttgaatggggaggcggtgtccgag
gagctccagcaggttgctcaggccgtgtataggctgttcgccgcggagtctgacagcacc
gataagccgccccttcagaaaaggaacgaattggagcgccttgtgggctacagcgtgcaa
gattcagtttctaaaaagctagctcagctagctcagaagctccgttcccttcaacgggtg
aacattcagggattcgttcaggaggacgccaagggtgtagatggagatgatgtgactgaa
tttggcgcaagctttgatttcaaagcacctgctcgtttcgttatcgatgttgatcttgat
gatgacctatcgtttgaaaaggagcagcacgatgcgtgcggcacatccacgagttttagc
tctaatgctgttgggggttctgtgaacttgaggtggctaaaggatcagtgtgatctgata
actacaagtggtggctcgatgctctcaggagatgaacttgcgatggctttgtgtagagtg
ctccgttcaaataagcctggcgatgagatagctggtgaactgttggacatggttggggat
gctgcctttgaaatagttcaagatcttctatcacataggaaagagctaggggatgcaatt
cagcatggattgacgatattgaaatcagaaaaggtgtcctcaaataatcaaccaaagatg
ccaacatatggcacacaagtaacagtacaaacggaatctgagcgtcagcttgataagatt
aagaggaaagagggaagacgtggtaaacgtggggcagaaaatggaatgggtgattttggt
gttgatgatttctcatcccttcttctggcaagtgaaagaaagcttccatttgaagacatg
attgggactggagaaggggagagtagttttcaagtaacttctcttcctcaaggaaccaca
aggaaacatatgaagggttatgaagaagtgaaaataccaccaactccaacagcgccattg
aaacccaatgagaaactgattaagataagagagttggatgatatcgcccaagctgctttc
cagggatacgagtcactcaaccgtgttcagagccgtatttttcaagccacgtacaacacc
aatgagaatattctagtttgtgctcctacaggtgctggcaaaacaaatattgcaatgatt
gcagttcttcatgaggttaagcagcacttcagggaagggattttgcataaaaatgagttc
aagatagtttatgttgcaccaatgaaggccttggctgcagaggtaacagcaacatttggt
cgtcgattatctccattgaacctggttgttagagaacttactggtgacatgcagttgaca
aaaaatgagattgaggaaacacagatgatagtgactactcctgaaaagtgggacgtcatt
acacgcaaaagcagcgatatggcactgtcaatgttagtcaagctgataatcatagatgaa
gtgcacctgctaaatgatgatagaggatcagttattgagacactagttgctcgaactctt
cgccaggttgagtccatgcaatcaatgattcgcattgttggcctatctgctacactgcct
acttacttagaggttgcacaatttttgcgagttaatgcagatactggccttttcaatttt
gactcaagttaccgtccagttcccctggctcaacagtacatcgggatcactgaaagggat
tacgccaagagaaatgaactgttcaatagtctgtgctatgagaaggttgtggagtccatt
aagcaaggttatcaagcattggtttttgttcatacccgcaaggatacagggaaaaccgct
aggaccatgattgacctagctgcaaaagcaggggaagtggagttattttcaaatgcagac
cacccccagtattcattaatcaagaaagatgttagtaaagccaaaagtcgtgaagttgta
gaattttttgaatctggatttggcatacataatgctggaatgatgcgttctgaccgaagt
ttgatggagcgcctgtttgctgatggtctcctgaaagtccttgtttgtacagcaacattg
gcgtggggagtaaacttaccagcccatacagttgttataaagggcacacaactatatgat
gctaaagctggcggatggaaagatttggggatgcttgacgtgatgcagatctttggacgt
gctgggaggccgcagttcgataaaagtggtgaaggaattattatcacaacacatgacaaa
ttggcttattacttgaggttattgactagtcagcttccaatagaaagccagttccttgga
tctttgaaagataatttgaatgctgaggttgcattgggtactgtaacaaatgtcagggag
gcatgtgcttggcttggctacacatacttatttatcaggatgaagacaaaccctctggtc
tatgggataacttgggaagaggtgattggagatccttccatgggtgccaagcaacgagca
tttattattgatgcagctcgtgcactagacaaggctaagatgatgcgatatgacgaaaag
agcggcaacttttactgcacagagcttggcagaattgcaagccacttttaccttcagtac
tccagtgttgagacatacaacgagatgcttcgtcgtcacatgagtgaaagtgaggtgatt
aatatggtggcccattcctctgaatttgaaaatattgtagtaagagaagaagaacaggac
gaattggaaattcttgccaggaaagcatgcccattggaaattaagggtgggccgactgac
aagcatgggaaaatttcaattctgatacaggtttatatttcccgtgcctcagttgatagc
tcctctttacactctgatgcccaatacattagtcaaagcttggctcgcattatgagggcg
ttgtttgagatttgtctgcgtagggggtggtctgagatgacatccttattattggaatat
tgcaaggctgtggatcgcaaaatatggccacatctccatccgcttaggcagtttgatagg
gacctttctcctgagatattgtggaaacttgaggaaagaaatgtggacctggatcgtctt
tatgagatggaggaaaatgatattggagctctgattcgtttttctcatcaaggaaggttg
gttaagcagtaccttggatacttcccgtatgtcaacttatctgcttgtgttagtccgatc
acgaggactgttcttaaagtggacctgcttataactcctgaatttgtgtggaaggatcgt
catcatggcatgtcacaacgatggttgattattgtggaggattctgaaaacgatactata
tatcattcagagctcttcacactgacaaagaagatggccagaggaatacctacaaaaata
tctttcaatatacctatctttgaaccccatcctccgcaatactatatccgagccgtatca
gactcctggttgcatgcagagtcactctttactgtctcttttcataatcttaccttgcca
cagacacaaataacacacactgaacttttggacttgaagcctcttccactgagcgctctt
ggcaacaaagcgtatgaagatctgtacagatttacccatttcaatccgatacaaacacag
gctttccatgttctttatcacactgataccaatgtactcttgggagctccaacagggagt
ggaaagacgatttctgcagaactagcaatgcttcatctttttaacactcaaccagacatg
aaggtagtttacattgctccaatgaaggctatagtgcgagagcgaatgaatgattggaga
aaacgacttgtaactcagcttgggaagaagatggttgagatgactggtgactttacacca
gatatgatggcccttttatcagctgatatcataatttctacccctgaaaagtgggatggg
attagtcgtagttggcacagtagaggctatgttatgaaggttggactcatgatactagat
gagatacatcttcttggagctgaccgtgggcctattcttgaggtcatcgtatcaagaatg
cgatacatatcatcacaaacagaacgttcaattcggtttgttggtttatcaacggcacta
gccaatgctcgtgacttggctgattggttgggcgtcagagaagatggtctatttaatttc
aagcctagtgtgaggccggtacctcttgaagtacatattcagggatatcctgggaagttc
tattgcccaagaatgaatagcatgaacaaaccagcatatgcagccatatgcactcattca
cctgacaaaccagtcctcatttttgtgtcatcacgtcgacagacaagacttacagccctg
gatctcattcagcttgcagcatctgatgagaaaccaaggcagttcctcagcatagcagat
aactctctagacatgattctttcacaagtcactgataataatttgagacatacgctccag
tttggaataggtctgcatcatgcgggtctaaatgatagagataggtcgttggttgaggaa
ctcttttcaaacaacaagattcaggtactagtatgtactagcacactggcctggggtgtc
aatcttccagctcacctggtcataatcaagggtactgaatactatgatgggaaaacaaaa
agatatgttgattatgttattacagatatactgcaaatgatgggtcgtgcaggccggcca
caatatgaccaacatggcaaagctgttattcttgttcatgaaccaaaaaagagcttttat
aagaagttcctgtatgaaccgttccccgtggaaagtaatctgagggagcacttgcatgat
cacataaacgcagagattgtttctagcacaattggtaataaagaggaggcaattatttat
cttacttggacttacctatatcgcaggctggttgtgaacccatcttactatggattggaa
gatactgaaacatttaccttgaattcttacctttcgaggttagtggaaactacatttgaa
gatctcgaagacagtggatgcataaaagtggatgaccattctgtgcagtccttgattttg
gggaaaatagcatcacaatattaccttagttaccttactgtctcaatgtttgggtcaaat
attggtcccaatacatcactggaagcctttgtgcacatactatcggctgcagcggaattt
gatgaacttcctgtacgtcacaatgaggataacttgaatcgagcactatgtgaaaaggtc
ccttattcagttgaccagcaccgccttgatgacccacatgttaaggctaatttactcttc
caggcacacttctccagagcagaattaccaatgagtgactacatcactgacttgaagtca
attctggatcagagcatacgtattatacaggctatgattgatgtatgtgccaacagcgga
tggctttcaagtgcattgacttgtatgcatctcttacaaatgatcatacagggtctctgg
tttgagagagattcatcgctatggatgttaccatccatgaatgataatcttctagaccat
ctaaaaggtagaggagtttcaacagttctgaacttgctagatcgttctggtgaagaatta
cgtaagctgcttcaaccgtttgcagcaccagagttgtctcaggatctgcaacatttccct
cgcctcgatgtaaatgtcaagttacagaatgaagttaagggtcagtcgaaacctccaatg
ttgaatattagaatgcaaataaaaaattcacggcgttcgtcaagagcattttcccctaaa
ttcccaaaggtgaaacaagaagcttggtggttggtcctggggaatgttacaagctcggag
ctatatggtctgaagagaattagttttgcagatcgtgtgcttaacactcggatgaaattg
ccacagacgttcaatgcccaggagacaaagctgattgtggtgtcagattgctaccttggc
tttgatcaggaggtctctcttgggcatctagcatag
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integrated database retrieval system
