Lolium perenne (perennial ryegrass): 127296668
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Entry
127296668 CDS
T08650
Name
(RefSeq) phytochrome A type 4 isoform X1
KO
K12120
phytochrome A
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
127296668
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GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HATPase_c
PAS_9
PAS_4
HisKA
PAS_8
PAS_10
Motif
Other DBs
NCBI-GeneID:
127296668
NCBI-ProteinID:
XP_051182807
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Position
4:367234679..367241783
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AA seq
1148 aa
AA seq
DB search
MHKRRDTQHIRDTTAEWFKYLKQEMSSSTSTSSSSSRNRQSSQARVLAQTTLDAELNDEY
KESGGSFDYSKLVEAQRTAPPLQQGRLEKVIAYLQHIQTGKILQPFGCLLDLDEKSFNVI
AFSENAPEMLTTVSHEVTSVDNPPRLGIGTNVESLFTDQGATALHKALGFADVSLLNPIL
VQCKTSGKPFYAIVRRSTGCLVVDFEPVEPTEFPATAAGALHSYKLAAKAISKIQSLPGG
SMEVLCSTVVKELFDLTGYDRVMAYKFHEDDHGEVFAEITKPGLETYLGLHYPATDIPQA
SRFLFMKNKVRMICDCRARSIKVIEDEARPFDISLCGSALRAPHSCHLQYMENMNMIASL
VMAVVVNDDEEEDEVESEQPAQHQQKKKLWGLLVCHHESPRYVPFPLRYACEFIAQVFSV
HVSKEFELEKQLHEKSILRMQTVLSDMLFREASPLTIVSGTPNVMDLVKCDGAALLNGGK
VWRLCNAPTESQIHDIALWLSEVHRDSTGLSTDSLHDAGYPGASALGDMICGMAVAKINS
KDIVFWFRSHTAAEIRWAGAKNDSSDMDDSRKMHPRLSFKAFLEVVKMKSLSWTDYEIDA
IHSLQLILRDKLNDAIKPTYEASLDKQIGDLKLDGLAEMQAVTSEMIRLIETATVPIFAV
DVNGLVNGWNQKAAELTGLRIDDAIGRDILSLVEKSSELVVQRMLYLALQGKEEKEVQFE
VKTHGPMVDDVPVILIVNACATRDLHGHVIGVCFVAQDMTVHKLAMDKFTRVERDYMAII
HNPNPLIPPIFGADEFGWCSEWNAAMTKLTGWHRDEMLDKMLLGEVFNSSNASCRLKNKN
AFVGLCVLVNSALAGEGSEKAPFGFFDRSGKYIECLLSVNRKENEDGLITGVFCFIHVAS
QELQHTLQVQKASEQKSLKRLKAFSYMRHAISNPLSGMLYSRKALKNTGLNEEQMKQIHV
ADNCHNQLNKILMDLDQDNITEKCSCLDLEMAEFVLQDVVMAAVSQVLLACKGKGITVSC
NMPEIFLKQLVYGDGVRLQQILSDVLFVAVKFSPVGGSVGISSKLTKKSIKGNLHLIDLE
IRIKYQGLGVPAELMSQMFEEDSKEKSEEGLALLVSRNLLSLMNGDVRHLREADVSTFIL
TFELGMGQ
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgcacaaaaggcgtgacacacagcatatacgagacacaactgccgagtggttcaagtac
ttgaagcaggaaatgtcttcctcaacgtctacttctagttcttctagccggaaccgccag
agctcccaggcaagggtattagcacagacaacccttgatgctgaactcaatgatgaatat
aaagaatctggtggctcctttgactactccaagctggttgaagcccagcggactgctcca
cctttgcagcaggggcggttggagaaggtcatagcctacttgcagcacattcagacagga
aagatactccaaccatttggttgcttgttggaccttgatgagaagagcttcaatgtcatc
gcgttcagtgagaatgcgccggaaatgcttacaacagttagccatgaagtaaccagtgtt
gacaaccccccaaggctaggcattggcacaaatgtagagtctcttttcactgaccaaggt
gccacggcgctgcataaggcactgggttttgctgatgtttctttgctgaatcctatcctg
gttcagtgcaagacctcaggcaagcctttctatgccattgttcgtcgatcaactggttgt
ttggtggtagactttgagcctgtagagcctacagaatttcctgccactgctgctggggct
ttgcactcttacaagcttgctgccaaggcaatctctaagatccagtcacttccaggtgga
agcatggaagtgctatgcagtactgtggttaaagaactctttgaccttacagggtatgat
agggttatggcttacaagtttcatgaggatgaccatggcgaggtctttgccgagatcaca
aagcctggtcttgagacttatctaggtctgcactatccagccactgatatcccccaagca
tccaggtttcttttcatgaagaacaaggtacggatgatctgtgattgccgtgcgagatcc
ataaaggtcatcgaagacgaggcacgtccctttgatattagcttgtgtggttcagcactc
agggcaccacacagttgtcaccttcagtacatggagaacatgaacatgattgcatccctt
gtcatggctgtcgtggttaatgacgatgaagaggaggatgaagtcgagtctgaacaacca
gcacaacaccagcagaagaagaaactatggggcctccttgtttgccatcatgagagcccc
agatatgtcccttttccgctgcgttatgcttgtgagttcatagcacaggtgttttctgtc
catgtaagcaaggagtttgaattggagaaacagctgcatgagaagagcatactgaggatg
caaaccgttctttctgacatgctgttcagagaagcctctcccctgactattgtatcaggg
acacccaatgtcatggacctagtcaaatgtgatggtgctgctcttttgaatggaggcaaa
gtatggcgcctgtgtaatgctccgaccgagtctcagatacatgatattgccttatggctg
tcagaagttcatagggattccactggcctgagtactgatagcctccatgatgctggctat
ccaggagcttctgctcttggtgatatgatttgtggaatggcagtggccaagattaactcc
aaggatattgttttttggttcaggtcacatacagctgctgaaatcagatgggcaggtgca
aagaatgattcctcggacatggatgacagcagaaagatgcacccaagactgtctttcaaa
gcattccttgaagttgtcaagatgaagagcttgtcttggactgactatgagatagatgct
attcattcgttgcaacttatacttcgagataagctgaatgatgccatcaagccaacctac
gaagctagtttagataaacagattggtgatcttaaacttgatgggcttgcagaaatgcag
gcggtgaccagtgaaatgattcgtctaattgaaacagcaactgttccaatattcgcagta
gatgtcaatggattggtcaacgggtggaatcagaaagcagcggaattgactgggctaaga
attgatgatgctatcggaagagacatactttcccttgtggagaaatcttctgaactagtt
gtccagaggatgctatatctggctttgcagggtaaagaagagaaagaagttcaatttgag
gtaaagactcatggccccatggtggatgatgtccctgttatcttgattgtgaatgcttgt
gcaacccgggaccttcatggtcatgttattggggtgtgctttgtagcccaagatatgact
gtccataagttggcgatggacaagtttactcgggttgagagagactacatggcgatcatt
cacaacccaaacccactgattcctcctatatttggtgctgatgaatttggatggtgctct
gagtggaatgctgcaatgaccaagctaactgggtggcacagagatgaaatgcttgataag
atgcttcttggtgaagtgttcaacagtagcaatgcctcctgccgtttgaagaacaaaaat
gcatttgtaggtctttgcgttcttgtcaatagtgcactagccggcgaaggatcagaaaag
gctccatttggctttttcgaccgaagtgggaagtacattgagtgtcttctatcagtgaac
agaaaagaaaatgaggatggtctcatcactggagtattctgttttattcatgtcgctagt
caggagctgcaacatacactacaggtgcagaaagcttcggagcagaagtcactaaaaagg
ctgaaggctttctcctacatgaggcatgcaatctcgaaccctctctcaggcatgctttac
tcaaggaaagcactgaagaacacaggtttaaatgaagaacagatgaagcagatccatgtc
gcagataattgtcacaaccagctaaacaagatactcatggacttggatcaagataacatc
accgaaaaatgtagctgcttggatttggagatggctgaatttgtgttgcaagatgtggtg
atggctgctgtaagtcaagtactgctagcctgcaagggaaaagggatcacagtctcttgc
aacatgccagagatatttctgaagcaattagtctacggagatggtgttcgactccagcag
attctctctgatgtcctatttgttgcagtgaagttctcccccgttggaggttctgttggg
atttcttccaagctgacaaagaaaagcatcaaaggaaatcttcatcttattgaccttgaa
atcaggatcaagtaccagggattaggagtcccagcagagctaatgtcccaaatgtttgag
gaggacagcaaggagaagtcagaggagggcctggccctcctagtatctagaaacctgttg
agtctcatgaatggcgatgtacgccatctaagggaagctgacgtgtcaaccttcatcctc
accttcgaacttggaatgggacaatga
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