Lolium perenne (perennial ryegrass): 127296745
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Entry
127296745 CDS
T08650
Name
(RefSeq) cell division control protein 48 homolog D
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127296745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lper03019
]
127296745
03009 Ribosome biogenesis [BR:
lper03009
]
127296745
04131 Membrane trafficking [BR:
lper04131
]
127296745
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lper04147
]
127296745
Messenger RNA biogenesis [BR:
lper03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
127296745
Ribosome biogenesis [BR:
lper03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
127296745
Membrane trafficking [BR:
lper04131
]
SNARE
SNARE associated proteins
Others
127296745
Autophagy
Aggrephagy
Other aggrephagy associated proteins
127296745
Exosome [BR:
lper04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127296745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_33
AAA_16
AAA_2
AAA_5
AAA_22
CDC48_2
AAA_14
TIP49
NPHP3_N
AAA_17
RNA_helicase
nSTAND3
Mg_chelatase
AAA_28
AAA_18
IstB_IS21
ABC_tran
Vps4_C
ATPase_2
Parvo_NS1
Viral_helicase1
AAA_7
AAA_lid_PRS2_C
Zeta_toxin
NB-ARC
ResIII
DUF815
TsaE
NACHT
Sigma54_activ_2
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
127296745
NCBI-ProteinID:
XP_051182911
LinkDB
All DBs
Position
4:363840751..363845349
Genome browser
AA seq
812 aa
AA seq
DB search
MATPTPQGEASSSDPKGAKKDYSTAILERKKSPNRLVVDEATNDDNSVVALHPDTMERLQ
LFRGDTVLLKGKKRKDTICIVLADDTCEEPKVRMNKTVRKNLRVRLGDVVSVHQCPDVKY
GKRVHILPIDDTVEGITGNLFDAFLKPYFLEAYRPLRKGDLFLVRGGMRSVEFKVIETDP
AEYCIVAPDTEIFCDGEPIKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFK
SIGVKPPKGILLFGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFE
EAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPN
SIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVELEHISRDTHGYVGADL
AALCTEAALQCIREKMDIIDLDDETIDAEILNSMAVTNDHFKTALTTSNPSALRETVVEV
PNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAI
ANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRGSSVG
DAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDVE
SRLQIFKACLRKSPVAKDVDLDALAKYTQGFSGADITEICQRSCKYAIRENIEKDIERER
RKKDNPEAMEEDETDEIAEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSE
FRFPDAPASGAAAAADPFASSAAAAEDDDLYS
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atggccaccccgaccccgcagggcgaggcctcctcctccgatccgaagggcgcgaagaag
gactactcgacggcgatcctcgagaggaagaagtcgcccaaccgcctcgtcgtcgacgag
gccaccaatgacgacaactccgtcgtcgcgctccaccccgacaccatggagcgcctccag
ctcttccgcggcgacaccgtcctcctcaagggtaagaagaggaaggacacaatctgcatt
gtgcttgcagatgacacatgcgaggagccaaaggtcagaatgaacaaaaccgtcaggaag
aacttgagagtgagacttggcgacgtggtgtctgtccatcagtgcccagatgtcaaatac
ggcaagcgtgtgcacattcttcctattgatgacacggttgaaggcattactgggaacttg
tttgatgccttcttgaagccatacttccttgaagcttaccgccctttgagaaagggagac
cttttccttgtgaggggtggaatgaggagtgtggaattcaaagttatagagactgaccct
gcagagtattgcatcgtcgcacctgacactgagatattctgtgatggtgagcctattaag
agggaagacgaggaaaggcttgatgaggttggctatgatgatgttggtggagttaggaag
caaatggcccagatcagagaactggttgaactcccactgcgtcatcctcagctcttcaag
tctattggcgtgaagcctcctaagggcatattgctgtttggaccacctggctctggcaag
acccttatcgctagagctgttgctaatgaaactggtgcattcttctttctgattaatggc
ccagaaattatgtccaagctagcaggagaaagtgagagcaatctcaggaaggcatttgaa
gaagctgagaagaatgcaccatcaatcattttcattgatgagatcgattcgattgcacca
aagagagagaagaccaatggagaggttgagaggcgtattgtttcacagctgttgactctt
atggatgggctcaagtcccgtgcacatgttattgttatgggcgctacaaaccgcccaaac
agtatcgatcctgccctcagaagatttggtagatttgatcgggagattgacattggtgtc
cctgatgaagttgggcgcctggaagttctccggattcacaccaaaaacatgaagttggct
gaagatgttgaactggaacacatttcaagagacacccatgggtatgttggtgctgatctc
gctgccctttgcactgaggctgctctccaatgcattcgtgagaaaatggatattatagat
ctcgatgatgagaccattgatgctgagattctgaactcaatggctgtgacaaacgaccat
ttcaagactgcattaacaacaagcaacccatctgctctccgtgaaactgtcgttgaagtt
cccaatgtctcttgggaagatattggtggtctggagaatgtcaagagggagttgcaggag
actgtccaataccctgtggagcatccagagaaattcgagaagtttggcatgtctccttcc
aaaggtgttttgttctacggccctcctggctgtggtaaaactctgttggcaaaggcaatt
gctaatgagtgccaggctaacttcatcagtatcaagggacctgagctgcttaccatgtgg
tttggagagagtgaggctaatgtgcgtgagatcttcgacaaggctagggggtcagcgcca
tgtgtcctcttctttgatgagcttgactcaattgctacccagagaggaagcagcgttggg
gatgctggaggtgctgctgatagagtgctcaaccagctcctgactgagatggatggcatg
aacgccaagaaaactgtgttcatcatcggtgccaccaacaggcctgacatcattgaccct
gcgttgcttaggccagggcgtcttgatcagcttatctacatccctctccctgatgttgag
tccaggctccagatcttcaaggcttgcctcaggaagtcccctgtggccaaggatgttgat
ctggatgctctcgccaagtacacccaagggttcagtggtgctgatatcactgaaatttgc
cagcgttcttgcaaatatgccatcagggagaacattgaaaaggacatcgaaagggagagg
cggaagaaggacaaccctgaagccatggaggaagacgagactgatgagattgctgagatc
agggctgctcactttgaggagtcgatgaagtatgcgcgccgtagtgtgagtgatgctgac
atccggaagtaccaggcctttgcccagactctgcagcaatctcgtggattcggcagcgag
ttccggttccctgacgctcctgcttcaggcgcagccgctgctgcagatccttttgcgtca
tcagccgctgcggcggaggatgatgatttatatagctag
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