Lolium perenne (perennial ryegrass): 127296852
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Entry
127296852 CDS
T08650
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03440
Homologous recombination
lper03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
127296852
03460 Fanconi anemia pathway
127296852
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lper03032
]
127296852
03400 DNA repair and recombination proteins [BR:
lper03400
]
127296852
Enzymes [BR:
lper01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
127296852
DNA replication proteins [BR:
lper03032
]
Eukaryotic type
DNA Topoisomerases
127296852
DNA repair and recombination proteins [BR:
lper03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
127296852
FA (Fanconi anemia) pathway
127296852
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_GRF
Zn_ribbon_Top1
Zn_ribbon_GRF_2
Motif
Other DBs
NCBI-GeneID:
127296852
NCBI-ProteinID:
XP_051183031
LinkDB
All DBs
Position
4:358510791..358519840
Genome browser
AA seq
966 aa
AA seq
DB search
MPPGGGAIRVLNVAEKPSVAKAVAEILSRGGMQSRAGRSRYNRVFEFNYAIGAQACHMLV
TSVTGHLMELDFDDRYRKWYSCDPVDLFHAPVRKAVPQDKQDIKRTLEEEARTCQWLVLW
LDCDREGENIAYEVVDICAGANRHLNIYRARFSALIPREIHDAVQHLARPNKLFADAVDA
RQEIDLRIGASFTRFQTMLLKDAFVLDVSGEERNMVLSYGPCQFPTLGFIVERFWEIQAH
EPEEFWTINCSHTSDEGTASFLWIRGHLFDYSSAVVIYEMCVEEPMATVHNVRNQEKLKY
PPYPLSTVELQKRASRCCRMSSEHTMKVAEELYQAGFISYPRTETDSFSPNTDLHAIVQE
QVEHPVWGTYAQRLLNPEERLWRNPSNGGHDDKAHPPIHPTKFTTGETNWSEDHRKVYEL
VVRHFLACCSQPAVGAETTVEIDIAGEQFNASGRVVLAKNYLDVYRYDSWGGSLLPTYTV
GQQFVPTTLTLDSGVTRPPPLLAEADLLSCMDKAGIGTDATMHEHIKKLLDRCYATKDAN
SRFSPTNLGEALVMGYDEMGYELWKPYLRSMMEADMKAVSIGTKSKSEVLQGCLQQMEAC
FRDARENKVKLLDAMGTFFARSNRPINETQPAEVVRRCGLCNASDMLLKRRPTGGFMVGC
GGYPLCRNVVWLPGSLAEAAVTQHICPTCVPGPVRKIQFKFNRRDIPPNYDVDHLGCVGG
CDDVLKELTELSRFGGHNQTATPARSQSQTQTPSGVRQGTPRQDLHTGFRPTGQFTNEHT
PVMNPQARGQSQNTSGVRQGAPPPRQDLHTGFRTGRQFANEQTPGVNPQGFRSTHTQSSR
NASDARQVLCTTCGEACISRTANTEANRGRKFYKCQNSCGFFAWEDELENVVPRGRGRGG
RGSSSRASASASAGRRGGGRGRRGRGRNNDGDGMTFVSATGDTVHGCCFTCGDPSHFANV
CPNRGR
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgcctcccggcggcggcgcgatccgcgtgctcaacgtcgcggagaagccgtcggtggcc
aaggccgtggcggagatcctgtcgcgcggcgggatgcagtcgcgcgcgggccggtcccgg
tacaaccgcgtcttcgagttcaactacgccatcggcgcgcaggcctgccacatgctcgtc
acctccgtcaccggccacctcatggagctcgacttcgacgaccgctaccggaaatggtac
tcctgcgaccccgtcgacctcttccacgcccccgtccgcaaggccgttccccaggataaa
caggacataaaaagaacattggaggaggaagctaggacgtgtcagtggcttgtgttatgg
cttgattgtgatagagagggtgagaatattgcatatgaagtggttgatatttgtgccggc
gccaaccgtcatctcaacatttatagagctcgtttctcagctttgattcccagggagata
catgatgccgtgcaacatcttgccagacccaacaagctctttgctgatgcggtggatgca
agacaggaaattgaccttcgcataggtgcctccttcactaggtttcagacaatgcttctt
aaagatgcttttgtccttgatgtcagtggggaagaaaggaatatggttctgagttatggt
ccttgccagtttccaaccctaggattcattgtcgagcgtttctgggagatacaagcgcac
gaacctgaagagttctggacaataaattgttctcacacttcagacgaaggcactgcatcc
tttctttggatacgtggtcatttgtttgattactcatccgctgttgtaatctatgaaatg
tgtgttgaagaaccaatggcaacagtacataatgtcagaaatcaggagaaactaaaatac
cctccatatccactaagtactgtggagcttcagaaacgtgcttctaggtgctgtagaatg
agttcagagcacacaatgaaggtggctgaagaactttatcaagctggattcattagttat
cccaggacagagactgatagtttctctccaaacactgacctacatgcaattgtacaagaa
caagtggagcatcctgtttggggaacgtatgctcaacgtcttttaaatcctgaagaaagg
ctctggagaaatcccagcaatggtggtcatgatgacaaggcacatcctcctattcatcca
acaaaatttactactggtgaaaccaactggtctgaagaccaccgcaaagtgtatgagctt
gttgttcgccacttccttgcttgttgctcccaacctgccgttggagccgaaacaactgtg
gaaattgacatcgctggtgaacagttcaatgcatcaggacgtgtcgtgcttgctaaaaat
tatttggatgtttatcgctatgactcatggggtggttcattacttccaacatacaccgtc
gggcagcagtttgttccgacaactttaacgcttgattcaggagtgactcgaccaccgcct
cttcttgctgaagctgacctccttagctgcatggataaagcaggaatcggcaccgatgca
accatgcatgaacacataaagaagctacttgaccgctgttatgcaaccaaagatgcaaat
tcacgtttctcaccaacaaatcttggggaggcattggtaatgggttatgatgaaatgggg
tatgagctttggaaaccttatttaagatcaatgatggaagctgatatgaaagcagttagt
atcggtacaaagagtaaatcggaagtacttcagggttgtttgcagcagatggaggcttgt
tttcgtgatgcaagggaaaacaaagtaaagcttcttgatgcaatggggacattctttgct
aggtcgaatagacctatcaacgagacacaacccgctgaagttgtaaggcgttgtggttta
tgcaacgcctctgatatgttgctaaagcgaaggccgactggtggttttatggttggctgt
gggggctatcctctgtgtagaaatgtagtatggctgcccggatcccttgcagaagctgct
gtgacacaacacatttgtcctacctgtgttccaggtcctgttcgtaagattcagttcaag
ttcaaccgaagggatatcccaccaaattatgatgttgatcacctaggttgcgttggtgga
tgtgatgatgtactcaaagaacttacagagctaagtagatttggaggtcataaccagact
gcaacaccagcacgaagccaaagccagactcagactccaagtggtgtaaggcaggggact
ccaaggcaggatttacatactggttttcgtccgacggggcaatttactaacgagcacaca
cctgttatgaacccccaagcaagaggtcaaagccagaatacaagtggtgtaaggcagggg
gctccacctccaaggcaggatttacatactggttttcgtacaggaaggcaatttgctaat
gagcagacacctggtgtgaatccccaaggttttcgttcaacccatacccaaagctcaaga
aatgcgtcagatgcgcgtcaagtattgtgcactacatgtggagaagcatgtatatcgcgg
actgctaatacagaggctaatagagggaggaagttctataaatgtcaaaattcttgcggc
ttcttcgcatgggaagacgagctggagaacgtggtgcccaggggccgtgggcgcggtggc
cgtggtagcagcagcagggcatccgcatcagcatcggcaggccggagaggcggtgggcga
ggcaggaggggccgcggccggaacaatgacggtgatggcatgacgttcgtttcagcgacc
ggcgacactgtgcacggctgctgcttcacctgcggtgacccttcccacttcgccaatgtc
tgcccgaaccgggggagatag
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