Lolium perenne (perennial ryegrass): 127296921
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Entry
127296921 CDS
T08650
Name
(RefSeq) nuclear pore complex protein NUP96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127296921
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lper03019
]
127296921
03036 Chromosome and associated proteins [BR:
lper03036
]
127296921
Messenger RNA biogenesis [BR:
lper03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127296921
Chromosome and associated proteins [BR:
lper03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
127296921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
127296921
NCBI-ProteinID:
XP_051183129
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Position
4:complement(354781529..354786383)
Genome browser
AA seq
1010 aa
AA seq
DB search
MAADSMFPVLRASDYFTRPSIDELVEREAADPGYCSRVPGFVVGRVRYGQVKFSGDTDVR
GLDLNGIVTFDRHCVEVYGDEAGKPAVGHGLNKAAEVTLRLDLRGLPEAGALVELLRCRA
KKQGARFLSFDPVNGNWKFEVDHFSRFGFVDEEEDDVAMDEAVGRQPPIAQVRDPPPNGH
QLELSHSLPAHLGLDPAKMQEMRSALFPNDEDDEDMEDGFPSDHRYLSRERMSVDTPDTS
AKGQRLRSLSPLHDSSQKFGRRSGMLPRKEPHALLEYHVNSPDPGPSSHGILMSGKNKGF
PMRMTKVEGFKLPAEQATPVAGKTYSNCVVDAALFMGRSFRVGWGPNGILLHSGSLVNCP
GTGLSSVVHIEKVAADKVVRDEQNKVKEELTELCFSDPMDLHRRLDREILETESGKFKLK
LHKVVASRFVLPEICRSYIDIIERQLEISDLSMSSRVLLMHQVTVWELIRVLFSERAAGN
QLEFSGDEDQEGMILDKKEGSANIDLEALPLARRADFSNWLQDSVCHRVQGEVGSLSDAR
YLEHIILLLTGRQLDTATEIAASRGDVRLAILLSQAGGSMLNRSDVAQQLGMWKINGLDF
NYIEEDRLKVYELLAGNVQGALLDSPLDWKRYLGLIMWYQLSPDTSLDILIHSYYQLLGE
GKVPNPVPVYIDEGPLEEALQWSPGDRFDISFYLMLLHANQDEKFGLLKTMFSAFSSSYD
PLDYHMIWHQRSILEAIGAFSTNDLHVLDLSFVHQLLCLGKCHWAIYVILHMQHVDDAPY
IHEKLIREVLSQYCEIWSKDEAQRQYIEELGIPAEWIHEALALYHEYYGDRQGALENYIQ
CGNWKKAHTIFMTSVAHSLFLSSKHQEIWDITNVLENHKSEIADWDVGAGIYIDYFIIKN
SMQEDSTMDDDDSDPLETKNESCKSFFIRLNDSLIIWGSKLPVEARACYSKMAEELCELL
MNSPGEGSAPGLYMGCFETMLNAPVPDDHRASYLQEAVSVFTDILCQDSF
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgactccatgttcccggtcctgcgtgcctccgactacttcactcggccgtcg
atcgacgagctggtcgagagggaggcggctgatccaggctactgcagccgggttccaggc
ttcgtcgtcgggagggtgaggtatggacaggttaagttctctggcgacaccgatgtgagg
gggttggacctgaatggaatcgtcacgtttgaccgccattgcgtggaggtttacggggac
gaggctggtaaacctgcggtagggcatggccttaataaagctgcggaggtgacgttgagg
ctggatctgagggggcttccagaggccggcgccctagttgagcttctgaggtgccgcgcc
aagaagcagggtgctaggtttctctctttcgatcctgtgaatggtaactggaagtttgag
gtcgatcacttcagcaggtttgggtttgtggacgaggaggaagacgacgttgccatggat
gaggcggttggtcgacaaccaccgattgctcaagtaagagacccacctcccaatggacat
caactggagctttcgcattcattgcctgctcatcttgggctggaccctgcaaagatgcaa
gagatgcggtcagccttgtttcccaatgatgaagatgatgaagatatggaggatggcttt
ccatctgatcacagatacctcagcagagagaggatgagtgtggatacacccgacaccagt
gctaaaggtcagaggctgaggtctctgtctcctttgcacgattcttctcagaaattcgga
aggagatctggtatgcttccgaggaaagaaccacatgcactgctggaatatcatgttaat
tctccggaccctggtccatcttctcatggtatacttatgtccggaaagaacaagggattt
ccgatgagaatgaccaaggtagaaggctttaaactgccagctgagcaagcaactcctgtt
gctggaaaaacatattctaactgcgtagtggatgctgctttattcatgggcagatcattt
cgagttggctggggaccaaatggcatccttctccattctggtagtctggtcaattgtcct
ggaactggcctttcttctgttgttcacatagagaaagttgcagctgataaagttgtgcgt
gatgagcagaacaaagttaaagaggagctgacggaactatgtttctcggatccaatggac
ctccacaggaggcttgatcgtgaaattctggaaactgagtctggcaaatttaaattgaag
cttcacaaagttgtggccagtcgtttcgttttgccagagatttgcaggtcatatatcgat
atcattgaaaggcagcttgaaatcagcgacttatctatgtcttcgcgtgtgctgttaatg
catcaagttactgtttgggagctgattagggtcttgttctctgagagagcagctggtaat
cagttggaatttagtggtgatgaggatcaggagggcatgattttggataagaaagaaggt
tctgcaaacatagaccttgaagcactccctttggctaggagagcagactttagcaactgg
ttacaggacagtgtttgtcaccgggtacaaggagaggtgggctccttaagtgatgccagg
tacttggaacatattattctgcttctgactggtcgacaattggacactgctacagaaatt
gctgcttcaaggggtgatgttcggttggcaatcttgctaagccaggcaggtggatcgatg
ttaaatcgatctgatgttgcgcagcaactaggtatgtggaaaataaatggtctggacttc
aattatattgaggaagacaggctaaaggtatatgagttgcttgctggtaatgtacaaggt
gctttactagattcaccacttgactggaaaaggtaccttggtttaatcatgtggtatcag
ttatcaccagatacatcacttgatatcctaattcattcttattaccaactacttggtgag
ggcaaagttccaaatcctgttcctgtatacattgatgaaggacctctcgaggaagcactt
cagtggtccccaggtgaccgtttcgacatatcattttatttgatgcttcttcatgccaac
caagatgagaagtttgggctgctaaaaactatgttcagtgcattctcgtcatcgtatgac
cccttggactaccatatgatctggcatcaacgctctattctggaagctattggagctttt
agtacaaatgatcttcatgtactggatttgagttttgttcatcagctactatgtcttggg
aagtgccattgggctatctacgtcattctgcacatgcagcatgtggatgatgcgccttac
atccatgaaaagttaatcagggaagttttgtcgcagtattgtgaaatatggagcaaagat
gaggctcagaggcaatatattgaagaacttggtataccagcagaatggatacatgaggct
ctggctctttatcatgagtactatggagaccggcagggtgcgctggagaattacattcaa
tgcggaaattggaagaaagctcatactattttcatgacatctgttgctcattccttgttt
ctgtcatcaaagcatcaagagatctgggacattaccaacgttttggagaatcacaagtct
gaaattgctgactgggacgttggtgctggaatatacatagactatttcattataaagaac
tctatgcaagaagatagtacgatggatgatgatgattcagatccacttgagacgaaaaat
gaatcatgcaagagtttcttcatccgattaaatgattcgctgattatctggggaagtaaa
ttacctgtcgaggcgagggcatgctactcgaagatggcagaggaactctgcgagcttcta
atgaattcccctggcgagggctcagcgccaggtctctacatgggctgctttgagacgatg
ctcaacgctcctgtccctgatgatcacagggcgtcctacctgcaggaggccgtctccgtt
ttcaccgacatactttgccaggattcattctag
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