KEGG   Lolium perenne (perennial ryegrass): 127297377
Entry
127297377         CDS       T08650                                 
Name
(RefSeq) DNA mismatch repair protein MSH2
  KO
K08735  DNA mismatch repair protein MSH2
Organism
lper  Lolium perenne (perennial ryegrass)
Pathway
lper03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lper00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    127297377
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lper03400]
    127297377
DNA repair and recombination proteins [BR:lper03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     127297377
SSDB
Motif
Pfam: MutS_V MutS_III MutS_II MutS_I MutS_IV ATG17_like NDC80_loop
Other DBs
NCBI-GeneID: 127297377
NCBI-ProteinID: XP_051183646
LinkDB
Position
1:complement(73680409..73689420)
AA seq 941 aa
MDGDDFLPEGGKLPELKLDARQAQGFISFFKKLPKDPRAIRLFDRRDYYTAHGENATFIA
KAYYHTMTALRQLGSNSDGISSVSVSRAMFETIARNLLLERTDHTLELYEGSGSSWRLTK
SGTPGNIGSFEDILFANNDMQDSPVTVALFPVVRESQLYVGLSFVDMTNRKLGLAEFPED
SRFTNVESALVALGCKECLLPADFDKSIDLQPLQDAISNCSVLLTERKKAEFKSRDLVQD
LGRIIRGSVEPVRDLLSQFDFALGALGALVSYAELLADDTNYGNYTIEKYNLDRYMRLDS
AAVRALNIAEGKTDVNKNFSLFGLMNRTCTAGMGKRLLNSWLKQPLLDVNEINNRLDMVQ
AFAEDPELRQGLRQQLKRISDIDRLTHALRRKSANLQPVVKLYQSCHRISYIKNVLQQYN
GQFSTLVNTRFLSSLEEWLAENRYGKFATLVETAIDLEQVDNGEYRISPLYSSDLAVLKN
ELSDVENHISNLHKHTATDLDLSVDKLKIEKGPFGHVFRISKKDEQKVRKKLTSNYIIIE
TRKDGVKFTSTKLKKLGDQYQTLFSEYASCQKTIVDDVVQVSCTFSEVFENFSAIISELD
VLQSFADLATSCPVPYVRPDITTSEEGDIILQGSRHPCLEAQDGVNFIPNDCTLVRGKSW
FQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDQASISVRDCIFARVGAGDCQLRGVS
TFMQEMLETASILKGASEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVTKAPALFATH
FHELTALANRNGDQNQHLPDLGIANYHVGAHIDPSSRKLTMLYKVEPGACDQSFGIHVAE
FANFPEAVIALAKSKAEELEDFSTAPNLSDERSDEVGSKRKRVFSPDDVTRGAARARLLL
EDFAALPLDEMDGSKAMEIVAKLKSEFEKDAASNPWLQQFL
NT seq 2826 nt   +upstreamnt  +downstreamnt
atggacggcgacgacttcctgccggaggggggcaagctcccggagctcaagctagatgcg
aggcaagcgcagggtttcatctccttcttcaagaagttgcccaaggatcctcgggccatt
cgtctcttcgaccgccgggattattacaccgcccatggtgaaaatgctacgtttattgca
aaggcgtactatcacacaatgaccgccttacgccaactaggcagtaactctgatggaatc
tcaagtgtcagtgtgagcagggctatgtttgaaaccattgcacgcaaccttttgcttgag
aggacagaccatacactggagctctatgagggaagtgggtcaagttggaggttaacaaaa
tctggaacacctggaaacattggcagttttgaagatattctgtttgcaaacaatgacatg
caagattctccggttactgttgcattgtttcctgtcgtccgtgaaagtcagctatatgta
gggcttagttttgtggatatgaccaaccggaagcttgggttggctgagttccctgaagat
agtcgattcacaaatgttgaatcagccctggttgcattaggctgcaaggagtgtcttctt
ccagcagattttgacaaatcaatagatttgcagcctcttcaggatgctattagtaactgc
agtgttctactgaccgaaaggaagaaggctgaatttaaatcaagagatcttgtgcaggat
cttggtagaataatcaggggttctgttgagccagttcgtgacctcctatctcagtttgac
tttgctttgggtgcccttggagctctagtatcatatgctgagttgctagcagatgatact
aactatggaaattacacaattgagaaatacaatttggaccgctacatgcgacttgattct
gccgcggtgcgagcattgaatatcgctgaagggaaaactgatgtaaacaagaattttagt
ttgtttggtttgatgaacagaacttgcactgctggaatgggaaagcggttacttaacagc
tggctgaaacaacctttgctagatgtaaacgaaattaataacagattagatatggttcag
gcttttgcagaagacccggagcttcgtcagggtcttaggcaacaacttaaaaggatatct
gatattgaccgcctaacacatgctctccggagaaaatcagccaacctgcagcctgttgtt
aagctctaccagtcctgccataggatctcatatatcaagaatgttcttcaacaatacaat
ggacaattttctacattggtaaatacaaggttccttagctctttagaagagtggctggca
gagaatcggtatggcaagtttgctactcttgtcgagacagctattgacctcgagcaagtt
gacaatggcgagtacaggatatctcccctatattcttctgatcttgctgtgctgaagaat
gagctttctgatgttgaaaatcatataagcaacttgcacaagcataccgccactgatcta
gatctttccgttgataagttgaagatagagaaagggccatttggacatgtgttcagaatc
tcaaaaaaagatgagcagaaagtcaggaaaaagctcacgagcaactacattatcatagaa
actcgtaaagatggtgtgaagtttacaagcaccaagcttaaaaagctaggtgaccaatac
cagacactgttcagtgaatacgccagttgccagaaaacgattgtcgatgatgtagtgcaa
gtttcatgcaccttctcagaggtatttgagaatttttctgcaatcatatccgagttggat
gttttgcaaagttttgctgatttggcaacaagttgcccagttccttacgtaagaccagac
atcacaacatctgaggaaggagatattattctacaaggtagtcgacatccttgcttggag
gcccaagatggtgttaactttataccaaatgattgcactttggtgagagggaaaagttgg
tttcagatcatcaccgggccaaacatgggcggaaaatcaacctttatacgacaggttggc
gtaaatatcttgatggcacaagttggctcctttgttccttgtgatcaggcaagcatcagt
gtgagagattgtatttttgctcgtgttggtgccggtgattgccaactccgtggtgtttcc
acctttatgcaagaaatgcttgaaacagcgtccatcttgaaaggtgcatctgagaagtcc
cttataattatcgatgaattgggacgtggaacttccacatatgatggatttggtcttgca
tgggctatctgtgagcatcttgtggaagtgacgaaggcacctgcattatttgccacccat
tttcatgaattaactgcattagcaaatagaaatggtgatcagaaccaacatcttccagat
ttgggaattgcaaattatcatgtgggtgcacatatagacccatcaagtcggaagttgact
atgctttataaggttgaacctggtgcctgtgaccaaagttttggtatccatgttgcggaa
tttgctaattttccagaagctgtcattgctcttgcgaaaagcaaagcagaagagttagaa
gacttctctactgcaccaaacttgagcgatgaacgcagtgatgaggttggatcgaagcgc
aaaagggtgtttagcccagatgatgtgaccaggggagctgctcgggctcggcttctgttg
gaggattttgctgcactgcctctagatgagatggatgggagcaaggccatggagatagtc
gccaaattgaaatccgagttcgagaaagatgcagccagtaatccatggcttcaacagttc
ctctga

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