Lolium perenne (perennial ryegrass): 127297377
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Entry
127297377 CDS
T08650
Name
(RefSeq) DNA mismatch repair protein MSH2
KO
K08735
DNA mismatch repair protein MSH2
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
127297377
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lper03400
]
127297377
DNA repair and recombination proteins [BR:
lper03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
127297377
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_I
MutS_IV
ATG17_like
NDC80_loop
Motif
Other DBs
NCBI-GeneID:
127297377
NCBI-ProteinID:
XP_051183646
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All DBs
Position
1:complement(73680409..73689420)
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AA seq
941 aa
AA seq
DB search
MDGDDFLPEGGKLPELKLDARQAQGFISFFKKLPKDPRAIRLFDRRDYYTAHGENATFIA
KAYYHTMTALRQLGSNSDGISSVSVSRAMFETIARNLLLERTDHTLELYEGSGSSWRLTK
SGTPGNIGSFEDILFANNDMQDSPVTVALFPVVRESQLYVGLSFVDMTNRKLGLAEFPED
SRFTNVESALVALGCKECLLPADFDKSIDLQPLQDAISNCSVLLTERKKAEFKSRDLVQD
LGRIIRGSVEPVRDLLSQFDFALGALGALVSYAELLADDTNYGNYTIEKYNLDRYMRLDS
AAVRALNIAEGKTDVNKNFSLFGLMNRTCTAGMGKRLLNSWLKQPLLDVNEINNRLDMVQ
AFAEDPELRQGLRQQLKRISDIDRLTHALRRKSANLQPVVKLYQSCHRISYIKNVLQQYN
GQFSTLVNTRFLSSLEEWLAENRYGKFATLVETAIDLEQVDNGEYRISPLYSSDLAVLKN
ELSDVENHISNLHKHTATDLDLSVDKLKIEKGPFGHVFRISKKDEQKVRKKLTSNYIIIE
TRKDGVKFTSTKLKKLGDQYQTLFSEYASCQKTIVDDVVQVSCTFSEVFENFSAIISELD
VLQSFADLATSCPVPYVRPDITTSEEGDIILQGSRHPCLEAQDGVNFIPNDCTLVRGKSW
FQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDQASISVRDCIFARVGAGDCQLRGVS
TFMQEMLETASILKGASEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVTKAPALFATH
FHELTALANRNGDQNQHLPDLGIANYHVGAHIDPSSRKLTMLYKVEPGACDQSFGIHVAE
FANFPEAVIALAKSKAEELEDFSTAPNLSDERSDEVGSKRKRVFSPDDVTRGAARARLLL
EDFAALPLDEMDGSKAMEIVAKLKSEFEKDAASNPWLQQFL
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggacggcgacgacttcctgccggaggggggcaagctcccggagctcaagctagatgcg
aggcaagcgcagggtttcatctccttcttcaagaagttgcccaaggatcctcgggccatt
cgtctcttcgaccgccgggattattacaccgcccatggtgaaaatgctacgtttattgca
aaggcgtactatcacacaatgaccgccttacgccaactaggcagtaactctgatggaatc
tcaagtgtcagtgtgagcagggctatgtttgaaaccattgcacgcaaccttttgcttgag
aggacagaccatacactggagctctatgagggaagtgggtcaagttggaggttaacaaaa
tctggaacacctggaaacattggcagttttgaagatattctgtttgcaaacaatgacatg
caagattctccggttactgttgcattgtttcctgtcgtccgtgaaagtcagctatatgta
gggcttagttttgtggatatgaccaaccggaagcttgggttggctgagttccctgaagat
agtcgattcacaaatgttgaatcagccctggttgcattaggctgcaaggagtgtcttctt
ccagcagattttgacaaatcaatagatttgcagcctcttcaggatgctattagtaactgc
agtgttctactgaccgaaaggaagaaggctgaatttaaatcaagagatcttgtgcaggat
cttggtagaataatcaggggttctgttgagccagttcgtgacctcctatctcagtttgac
tttgctttgggtgcccttggagctctagtatcatatgctgagttgctagcagatgatact
aactatggaaattacacaattgagaaatacaatttggaccgctacatgcgacttgattct
gccgcggtgcgagcattgaatatcgctgaagggaaaactgatgtaaacaagaattttagt
ttgtttggtttgatgaacagaacttgcactgctggaatgggaaagcggttacttaacagc
tggctgaaacaacctttgctagatgtaaacgaaattaataacagattagatatggttcag
gcttttgcagaagacccggagcttcgtcagggtcttaggcaacaacttaaaaggatatct
gatattgaccgcctaacacatgctctccggagaaaatcagccaacctgcagcctgttgtt
aagctctaccagtcctgccataggatctcatatatcaagaatgttcttcaacaatacaat
ggacaattttctacattggtaaatacaaggttccttagctctttagaagagtggctggca
gagaatcggtatggcaagtttgctactcttgtcgagacagctattgacctcgagcaagtt
gacaatggcgagtacaggatatctcccctatattcttctgatcttgctgtgctgaagaat
gagctttctgatgttgaaaatcatataagcaacttgcacaagcataccgccactgatcta
gatctttccgttgataagttgaagatagagaaagggccatttggacatgtgttcagaatc
tcaaaaaaagatgagcagaaagtcaggaaaaagctcacgagcaactacattatcatagaa
actcgtaaagatggtgtgaagtttacaagcaccaagcttaaaaagctaggtgaccaatac
cagacactgttcagtgaatacgccagttgccagaaaacgattgtcgatgatgtagtgcaa
gtttcatgcaccttctcagaggtatttgagaatttttctgcaatcatatccgagttggat
gttttgcaaagttttgctgatttggcaacaagttgcccagttccttacgtaagaccagac
atcacaacatctgaggaaggagatattattctacaaggtagtcgacatccttgcttggag
gcccaagatggtgttaactttataccaaatgattgcactttggtgagagggaaaagttgg
tttcagatcatcaccgggccaaacatgggcggaaaatcaacctttatacgacaggttggc
gtaaatatcttgatggcacaagttggctcctttgttccttgtgatcaggcaagcatcagt
gtgagagattgtatttttgctcgtgttggtgccggtgattgccaactccgtggtgtttcc
acctttatgcaagaaatgcttgaaacagcgtccatcttgaaaggtgcatctgagaagtcc
cttataattatcgatgaattgggacgtggaacttccacatatgatggatttggtcttgca
tgggctatctgtgagcatcttgtggaagtgacgaaggcacctgcattatttgccacccat
tttcatgaattaactgcattagcaaatagaaatggtgatcagaaccaacatcttccagat
ttgggaattgcaaattatcatgtgggtgcacatatagacccatcaagtcggaagttgact
atgctttataaggttgaacctggtgcctgtgaccaaagttttggtatccatgttgcggaa
tttgctaattttccagaagctgtcattgctcttgcgaaaagcaaagcagaagagttagaa
gacttctctactgcaccaaacttgagcgatgaacgcagtgatgaggttggatcgaagcgc
aaaagggtgtttagcccagatgatgtgaccaggggagctgctcgggctcggcttctgttg
gaggattttgctgcactgcctctagatgagatggatgggagcaaggccatggagatagtc
gccaaattgaaatccgagttcgagaaagatgcagccagtaatccatggcttcaacagttc
ctctga
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