KEGG   Lolium perenne (perennial ryegrass): 127297494
Entry
127297494         CDS       T08650                                 
Name
(RefSeq) cyclin-H1-1 isoform X1
  KO
K06634  cyclin H
Organism
lper  Lolium perenne (perennial ryegrass)
Pathway
lper03022  Basal transcription factors
lper03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lper00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    127297494
  09124 Replication and repair
   03420 Nucleotide excision repair
    127297494
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lper03021]
    127297494
   03400 DNA repair and recombination proteins [BR:lper03400]
    127297494
Transcription machinery [BR:lper03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     127297494
DNA repair and recombination proteins [BR:lper03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     127297494
SSDB
Motif
Pfam: Cyclin_C_2 Cyclin_N TFIIB RB_B TilS_C
Other DBs
NCBI-GeneID: 127297494
NCBI-ProteinID: XP_051183768
LinkDB
Position
4:complement(391531477..391538843)
AA seq 520 aa
MENASRIIVTTREEILFSKPTKHISRWDWAASTRRVTDPAQKFKAIGSALICFWGNRAGF
DRPTRRSPRLRPRPRPSLLPAAALPPASLRLPSVRVVAVLVAAVPVAAHLCCRWHCLVLA
VPLLPFQSTQRRHCLGCPLTAPTRSAPSSPSSSDSPRKARRPVQPRAIVQQCVLVRIRAG
TACFDSARESGGGGSAKMSDFQTSTHRERWIFQPQNLVDKWTGVNRRSAETLAQYGTTRL
KVDPVDGSISNPEPAPDHVVGSSGVKPLSCEEEQMMRRFYEQKIQEVCKAFKFPHKIQAT
AIIYFKRFYLQWSVMEHHPKHIMLTCVYSSCKVEENHVSAEELGKGINQDHQIILNNEMI
VLKSLDFDLIVFAPYRSIEGFIDDMDDFCRAGNGAHQRLKDLYQTANSHVDRMMLTDAPL
LYTPGQLALAALYKSNDALKVLDFERYLESVFSRQRLDCPVEQFVQIMNTINYLVDRLQI
LTQEDMKHADRKLRHCLDEHKKKEKKPKHKSKRTAGDARQ
NT seq 1563 nt   +upstreamnt  +downstreamnt
atggagaatgcaagccggatcatagtcaccacaagggaggagattttgttcagcaaacca
acaaaacatatatcaagatgggactgggccgcgtcgacccgccgggtcactgacccggcc
caaaagttcaaggccattgggtcggccttgatatgtttttggggcaacagagccggcttt
gatcgacccacccgtcgcagcccccgtctccgcccccgcccccgcccatctctgctgccg
gcggcggcgctgcctcctgcgtctctccggctgccttccgtacgggtcgtcgccgtcctg
gtcgctgccgtcccggtcgccgcccatctctgctgccggtggcactgcctcgtgcttgct
gtgccgctcctgccgttccagtcgacccaacgccgtcattgtctcggttgccctctgact
gctccaactcgttctgctcccagctcgccatcttcctccgattctccacggaaggcaagg
cgaccagtccagccaagagcaattgtgcagcagtgtgtgctggtgcgaattcgtgcaggg
actgcttgtttcgattcagctcgcgagagcggcggaggtgggagtgcgaagatgtcggat
ttccagacctccacgcaccgggagcggtggatcttccagcctcaaaacctggtagataag
tggacgggggtgaaccggcgttccgcggagaccctcgcgcagtatggaacgacgcgcttg
aaggtggaccctgtcgacgggtcgatatcgaaccccgaacctgcgcccgatcacgttgtc
gggagctcgggtgtgaagcctctatcctgcgaagaggagcaaatgatgcggagattttac
gagcagaagattcaggaagtgtgtaaagcattcaagttcccccacaagattcaggctaca
gcaataatatatttcaagagattctatctacagtggtccgtaatggagcatcacccaaag
catattatgttaacttgtgtatattcttcttgcaaagtggaagaaaatcatgtttctgct
gaggaacttggcaaaggaattaaccaggaccaccagattattttaaataacgaaatgatt
gttctgaaatctttagattttgatctgatcgtttttgctccatatcgatctatcgaaggg
tttattgatgacatggatgatttttgtagggcaggtaatggtgcacaccaacggttgaag
gatttgtatcaaactgcgaattctcatgttgacagaatgatgttgaccgacgcacctctt
ctctatactcctggacagttggcattggctgctctgtacaagtccaatgacgcactcaag
gtcctcgattttgaaagatacctggaaagtgttttttcaaggcaacgccttgattgtcca
gtcgaacaatttgttcagataatgaatacgattaattacttggttgaccggcttcaaata
cttactcaagaagacatgaaacatgctgatcgcaagctgagacattgcttggatgagcac
aagaagaaagaaaagaagccgaagcacaaatcaaaaaggactgctggcgatgcccggcag
taa

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