Lolium perenne (perennial ryegrass): 127298556
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Entry
127298556 CDS
T08650
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1-like
KO
K12236
transcriptional repressor NF-X1
Organism
lper
Lolium perenne (perennial ryegrass)
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lper03000
]
127298556
04121 Ubiquitin system [BR:
lper04121
]
127298556
Transcription factors [BR:
lper03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
127298556
Ubiquitin system [BR:
lper04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
127298556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_NFXL1
zf-NF-X1
NCBP3
R3H
Motif
Other DBs
NCBI-GeneID:
127298556
NCBI-ProteinID:
XP_051184367
LinkDB
All DBs
Position
5:38378570..38381902
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AA seq
1073 aa
AA seq
DB search
MQPSTDRRHGNGPATAASPALWRPRSAAARNPAAADPRPYGAHDDAAPILPLPNPPSHAR
PHRRRHRPNRRPAPPQDRAPANHRPPPQERAPLAPAPAPAPVITGVPQLVQEIQDKLARG
AVECMICYDAVRRSAPVWSCASCFSIFHLPCIRRWARAPASSVSDAASWRCPGCQSVHAV
AARDVAYTCFCGRRHDPPNDLFLTPHSCGEPCSKPLGKGDDDDAASTRCPHVCVLQCHPG
PCPPCKAFAPDRPCPCGKRTIARRCADRTTPVTCGQRCERLLPCRRHRCEKPCHTGPCGD
CQVTFPARCFCGNKTNTIPCGEMTGSLSDTAAAGAFSCGEACGHGLACGNHACEAACHAG
PCGECRLLPGTVTACHCGKTRLQGTRASCLDPIPACDKVCDKRLPCGAHRCNVTCHEGRC
PPCSARVEQRCRCGSSGRMVECYKASMEQFRCSKPCGRKKNCGRHRCSECCCPLSNPFAR
HEGGGVSVDPHFCRIPCGKKLRCGQHGCQHLCHSRHCDPCRETIFSDLTCACGRTSIPPP
QPCGTPTPSCPHPCTVPQACGHPASHQCHFGDCPPCVVPVTRECSGGHVMLRNIPCGSKD
IRCNQPCGKNRQCGLHACARTCHPSPCDPPPPASGDASSSSGSKASCGQSCGVPRRECKH
TCNAPCHPSSPCPDVRCEVRVAIACSCGRITSTVPCSAGGSYHNGDSMLDISIIEQLPRP
LQPVDSNGKRVPLGQRKLCCDEECAKMERKRVLAEAFDITQPNLDALHFGENSNASDLVS
DLYRREPKWVLAIEERCKFLVLGKTRGNSSSNIKVHVFCHMTKDKRDAIRLIADRWKLSV
QAVGWEPRLFVTIHVTPKSKVPARVLGSKAGVPVSASHPYFDPMVDMDPRLVVAMLDLPR
EADVSSLVLRFGGECELVWLNDKNALAVFGDPARAATALRRLDYGSAYQGASMFCPSSIT
QASASGNVWVGAQREGGSVAKTSANPWKMAGASESDPSVGWAVLGHSAGTSVLGQAPGSA
WRRGDAAGQVMDTNRWNALESATTSTRPIAGAGQALEKLQPDFEVEDWEESCE
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccctccaccgatcgccgccacggcaacggcccagccacggccgcctcccctgcc
ttatggcggccccgatccgctgctgcgcgtaaccccgccgccgccgacccccgtccctac
ggcgcccatgacgacgccgcccccatcctgcccctccccaacccgccatcccacgcccgc
ccgcaccgtcgccgccaccgccccaaccgccgccccgccccgccgcaggacagggctccg
gccaaccaccgaccaccgccgcaggagagggctccgctcgcgccagcgccagcgcccgcc
cctgtcatcacaggggtgccgcagctggtgcaggagatccaggacaagctggcccgtggc
gcagtcgagtgcatgatctgctacgacgcggtgcgcaggtcggcgcccgtctggtcctgc
gccagctgcttctccatcttccacctcccctgcatccgcaggtgggcgcgggccccggcc
tcctccgtctccgacgccgcctcctggcgctgcccggggtgccagtccgtgcacgccgtc
gccgcgcgcgacgtcgcatacacctgcttctgcggccgccgccacgacccgcccaacgac
ctcttcctcaccccgcactcctgcggcgagccatgctccaagccgctcggcaagggcgac
gacgacgatgctgcttccaccaggtgcccccacgtctgcgtgctccagtgccacccgggc
ccatgcccgccctgcaaggcgttcgcgccagaccgcccctgcccctgcggcaagcggacc
atcgcgcggcgctgcgcggaccggaccacgcccgtcacctgcggccagcgctgcgaacgc
ctcctcccctgccggcgccaccgctgcgagaagccctgccacacggggccctgcggggac
tgccaggtcaccttccccgcccgctgcttctgcggcaacaaaacaaacaccatcccgtgc
ggcgagatgacggggagcctttcggacaccgccgccgccggcgcgttctcctgcggcgag
gcgtgcgggcacggcctggcgtgcgggaaccacgcctgcgaggccgcgtgccacgcgggg
ccgtgcggggagtgccggctcctgccggggacggtcaccgcgtgccactgcggcaagacg
cggctgcaggggacgcgggcgagctgcctggacccgatccctgcctgcgacaaggtctgc
gacaagaggctgccgtgcggggcgcataggtgcaatgtcacgtgccacgaggggaggtgc
ccgccgtgctcggcgcgggtcgagcagaggtgccgctgcggctcgtcgggccggatggtg
gagtgctacaaggcctcgatggaacagttccgttgcagcaagccctgcggccgcaagaag
aactgcgggaggcaccggtgcagcgagtgctgctgcccgctgtcgaacccgttcgctcgg
catgaaggtggcggcgtcagcgtggatcctcatttctgccggataccgtgcggcaagaag
ctccggtgcgggcagcatggctgccagcacctctgccacagcaggcactgcgatccctgc
cgcgagaccatattcagcgatctcacctgcgcctgcggcaggacatccattccgccgccg
cagccgtgcggcacgccgactccgtcgtgcccgcacccgtgcaccgtccctcaggcctgt
gggcatccagcttcgcatcagtgccattttggggactgcccgccttgcgttgtgccggtg
acgagggaatgcagcggggggcatgtgatgttgaggaacatcccttgcggttcgaaggat
atcagatgcaaccagccttgtgggaagaaccggcaatgcggactgcacgcttgcgctagg
acttgccacccttccccttgtgatccaccgccacccgcaagtggagatgctagttcaagc
tctgggagcaaggcttcatgtggacagtcatgtggtgtcccgaggagggaatgcaagcac
acttgcaatgccccatgccacccgtcatcaccctgcccagatgtgagatgcgaagtccgt
gtggctattgcctgctcttgtggccgtatcacttcaactgtgccctgcagcgccggagga
tcataccacaatggtgatagtatgctcgacatctccatcatagagcagctgccaaggcct
ctccagccagtggattcaaatgggaagagggtacctcttggccagaggaaactctgctgt
gatgaggagtgtgcgaaaatggagaggaaaagagtccttgctgaagcttttgacatcaca
cagcccaatctggacgcactgcatttcggtgagaactcgaatgcctcggatttggtttct
gatctttaccggcgcgagccgaagtgggtgctggccatagaggagaggtgcaaatttctt
gtgcttgggaagacgagaggaaattcttcaagcaacatcaaggtccatgtcttctgtcac
atgaccaaggataagagggatgctatcaggctcattgcagataggtggaagctgtctgtt
caggcggtcggttgggagcccaggctgtttgttaccatccatgtcacacccaagtcgaag
gtgcctgctcgtgttctgggctccaaggctggtgtccctgtttcggcttcgcatccttac
tttgatcccatggtggatatggacccgaggctcgttgttgcaatgctggacctgccaagg
gaggctgatgttagctctctagtcttgaggtttggtggcgagtgtgagttggtttggctc
aacgacaagaatgccctggcagtcttcggtgatccagctagagccgccacagctctcagg
cggctggactatgggtctgcttaccagggtgcttcaatgttttgcccaagcagcatcact
caggcttcagcatcaggcaatgtgtgggttggagcacagagagagggaggatcggttgca
aagaccagtgccaatccgtggaagatggctggtgcctcggagtctgacccatctgtaggc
tgggcggtacttggtcattctgcggggacaagtgtgcttggtcaagctccagggtcagcg
tggagacgtggtgatgctgctggccaggtcatggatacaaacagatggaatgctctggag
tctgctaccacaagcaccaggccaatcgccggtgctgggcaagcactggagaagctgcag
ccagactttgaagtggaagactgggaagaatcatgcgagtga
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