Lolium perenne (perennial ryegrass): 127298683
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Entry
127298683 CDS
T08650
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1
KO
K13103
tuftelin-interacting protein 11
Organism
lper
Lolium perenne (perennial ryegrass)
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lper03041
]
127298683
Spliceosome [BR:
lper03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
127298683
Other components
Complex C specific factors
127298683
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Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
127298683
NCBI-ProteinID:
XP_051184480
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Position
5:28235277..28238292
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AA seq
844 aa
AA seq
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MEEDAEGMDRLDMDGDFVGGRFGRDGEFYYEARRERAPQTRDDALYGVFADGDSDYDSDE
DEASRRRRRFKRRRDEAEPDLTRPVQFVSKGVTDPQQPDEPEEEQRHGLGQAASSSRTAA
VASEEEDQEEGYIDLPTGFGQRIAEGARARREEKERQEESAKRRRKAQSAGFEPGKPAPA
PGSLESNAKVAKMMAMMGYKRGEGLGKNAQGITAPVETTLRPKNAGLGSVEGFKEPKAFT
PKEKLPAPPPPPPAKKEKQRWSKKASVKKDQVMTKNELLARRAEQEHDEQPAFVQKVIDM
RGPQARVLTDLKGLSTEHEMEANDVPMPELQYNVRLLVEETEADIVRLDGQLRREQEKVA
SLVREKEKAAKQEALQKHQLQVMEAIAGVLEQVRVDDTTGLLTLGGLLKTFQELKLSYEE
EFKMCSVAWVACRFAHPLLIRVFQGWQPLQNPSFGLEVMSSWKDLLQGDQPYDFSDATES
MAPYAQLVSEVILPAVRISGTNSWEARDPEPMLRFLESWERLLPPIVLHSILEHVIMPKL
TAAVDSWDPRREKVPIHVWVHPWLPTLGQRIETLCHSIRYKLSSVLHVWQAHDSSAYAVL
SPWKGVFDTASWEDLILRYIVPKLQMALQEFQINPASQKFDQFNWVMIWASAVPVHHMVH
MLEVDFFSKWQQVLYHWLCSPNPDFNEIMNWYKGWRGLFPPELLANERIRMLLTSGLEMM
NQAAEGLELVQPGARENVGFLRATEKRQFDAAQQASHRAVPGAAMSDMSFKDSIQEYAVD
QGLLFMPRVGKFYKGMPVYEFGTVSVCIDSAKRLLYAQLQEGAERWSSVSLTQLLEMNRM
ARPR
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggacgccgagggcatggaccgcctcgacatggacggcgacttcgtgggcggc
cgcttcggccgcgacggggagttctactacgaggcccgccgcgagcgcgcgccccagacc
cgcgacgacgccctctacggcgtcttcgccgacggggactccgactacgactccgatgag
gacgaggcgtcgcgccgccgccgacggttcaagcgccgcagggacgaggccgagcctgac
ctcaccaggcccgtgcagttcgtctccaagggcgtcactgacccccaacagcccgacgag
ccggaggaggagcagcggcatgggcttggccaggctgcgtcctcctcgcgcaccgctgcc
gtcgcatccgaggaggaggaccaggaagaagggtacatcgacctgccgacggggttcggg
cagcggattgccgagggtgcgcgcgcgaggcgggaggagaaggagcggcaggaggagtca
gccaagcgccgccgcaaggcgcagtcggcagggtttgagcctgggaaacctgcaccggcc
cctgggagcctggagtccaacgcgaaggtggccaagatgatggctatgatggggtacaag
agaggggaaggcctaggcaagaatgctcagggaatcaccgcgccggtggagaccaccttg
cgccccaagaacgccgggctcggcagcgtcgaggggtttaaggagcccaaagcgttcacc
cccaaggagaagctgccagccccgccgcctccaccgcctgccaagaaggaaaaacaacgg
tggtccaagaaggccagcgtgaagaaagatcaggtcatgacgaagaatgagctgctggcg
aggcgtgccgagcaggagcatgacgagcagcctgcgtttgtccagaaggttattgacatg
cgtgggcctcaggctcgtgtgctgacggacctgaagggtctcagtactgaacacgagatg
gaggcaaatgacgtgccgatgccggagttgcagtacaatgtgcggctgcttgttgaggag
actgaggctgatattgtcaggttggatgggcagctgcggcgggagcaggagaaggttgct
agtttggtgcgcgagaaggagaaagcagcaaagcaggaggctttgcagaaacaccagctg
caagttatggaggcaattgccggtgtgctggagcaggtccgggtggatgacaccactggt
ttgctcactctgggaggcttgcttaagaccttccaggaactgaagctgagctatgaggag
gagttcaaaatgtgcagcgttgcatgggttgcttgccgattcgcgcatccgctgttgatc
cgggtctttcaggggtggcagccgctgcagaatccgtcgtttggcttggaggtcatgtca
tcgtggaaggatctgctgcagggagaccagccatacgacttctcagatgctactgaatca
atggctccatatgcgcagctggtcagtgaggtcatcctaccagctgtgaggatatcagga
actaattcatgggaggctagggatccggaaccaatgctccgctttctcgaatcatgggaa
cggttgctgccccctatcgtgctccattcaatattggagcatgtgatcatgccaaagctc
acagctgcagtcgactcttgggacccgcggagggagaaggtaccaatccatgtatgggtg
cacccatggttgcctactctagggcaaaggatagagacattgtgccactctattcggtac
aagctgagtagcgtcctccatgtatggcaagctcacgattcatcagcttatgctgttcta
tccccatggaagggtgtatttgatacggcaagttgggaagacttgatactgcgctatatc
gttcctaaactgcaaatggcactccaggagtttcagatcaacccagcaagccagaagttc
gatcagtttaactgggttatgatttgggcttctgctgtcccggtgcaccatatggtccat
atgttggaagttgatttctttagcaagtggcagcaggtcctctaccactggctgtgttca
ccgaatccggatttcaatgagatcatgaattggtacaagggctggagggggcttttccca
ccagagttacttgctaatgagcgcatacggatgcttctaacgtctggtcttgagatgatg
aaccaagctgcggaaggacttgagttggtgcagccaggggcaagggagaatgtgggcttt
ttgagagcaacagagaagcggcaatttgatgcagcacagcaagcatcacaccgtgctgtg
ccaggagcagccatgtcagatatgagcttcaaggactctattcaggaatatgcagttgac
caaggtttgctgtttatgcctagggttggcaaattttataagggcatgccagtgtatgaa
ttcggcacagtgagtgtttgcatagattccgccaagcgactactctatgcgcaactacaa
gagggagctgaacggtggagttctgtgtctcttacgcaattgctggaaatgaacaggatg
gcgagaccacgctag
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